Information for 5-TTAAVTTGTC (Motif 34)

A G C T C G A T T C G A C G T A T A C G C G A T C A G T A T C G A G C T G A T C
Reverse Opposite:
C T A G C T G A A T G C G T C A C G T A A T G C G C A T A G C T C G T A T C G A
p-value:1e-8
log p-value:-2.029e+01
Information Content per bp:1.658
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif5.90%
Number of Background Sequences with motif989.1
Percentage of Background Sequences with motif2.11%
Average Position of motif in Targets50.0 +/- 27.2bp
Average Position of motif in Background51.6 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0165.1_Sox11_2/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TTAAVTTGTC-----
-AAAATTGTTATGAA
 A G C T C G A T T C G A C G T A T A C G C G A T C A G T A T C G A G C T G A T C A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:2
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TTAAVTTGTC--
--CCATTGTTNY
 A G C T C G A T T C G A C G T A T A C G C G A T C A G T A T C G A G C T G A T C A C G T A C G T
A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

PB0173.1_Sox21_2/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TTAAVTTGTC------
AATCAATTGTTCCGCTA
 A C G T A G C T C G A T T C G A C G T A T A C G C G A T C A G T A T C G A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

PB0175.1_Sox4_2/Jaspar

Match Rank:4
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TTAAVTTGTC-----
GGAAAAATTGTTAGGAA
 A C G T A C G T A G C T C G A T T C G A C G T A T A C G C G A T C A G T A T C G A G C T G A T C A C G T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0066.1_Sox17_1/Jaspar

Match Rank:5
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TTAAVTTGTC---
NNATNAATTGTTTNN
 A C G T A C G T A G C T C G A T T C G A C G T A T A C G C G A T C A G T A T C G A G C T G A T C A C G T A C G T A C G T
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:6
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TTAAVTTGTC------
TTCAATTGTTCTAAAA
 A G C T C G A T T C G A C G T A T A C G C G A T C A G T A T C G A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

Mecom/MA0029.1/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TTAAVTTGTC--
TNTTATCTTATCTT
 A C G T A C G T A G C T C G A T T C G A C G T A T A C G C G A T C A G T A T C G A G C T G A T C A C G T A C G T
A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.70
Offset:4
Orientation:forward strand
Alignment:TTAAVTTGTC
----ATTGTT
 A G C T C G A T T C G A C G T A T A C G C G A T C A G T A T C G A G C T G A T C
A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T

PB0065.1_Sox15_1/Jaspar

Match Rank:9
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TTAAVTTGTC-----
ANNTCTATTGTTCNNNA
 A C G T A C G T A G C T C G A T T C G A C G T A T A C G C G A T C A G T A T C G A G C T G A T C A C G T A C G T A C G T A C G T A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

PB0072.1_Sox5_1/Jaspar

Match Rank:10
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTAAVTTGTC-----
NNTTTATTGTTCTNNN
 A C G T A G C T C G A T T C G A C G T A T A C G C G A T C A G T A T C G A G C T G A T C A C G T A C G T A C G T A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A