Information for 16-CTGCVVTGGGGGCAAG (Motif 28)

A T G C A C G T A T C G A G T C T A C G T A G C A C G T A T C G A C T G T A C G A C T G A T C G A T G C G T C A C G T A A C T G
Reverse Opposite:
A G T C A C G T C A G T A T C G A T G C T G A C A T G C G T A C A T G C G T C A A T C G A T G C T C A G A T G C C G T A A T C G
p-value:1e-9
log p-value:-2.195e+01
Information Content per bp:1.766
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.2 +/- 22.5bp
Average Position of motif in Background37.8 +/- 13.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTGCVVTGGGGGCAAG
-TGCCCTGAGGGCA--
 A T G C A C G T A T C G A G T C T A C G T A G C A C G T A T C G A C T G T A C G A C T G A T C G A T G C G T C A C G T A A C T G
A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTGCVVTGGGGGCAAG
-TGCCCTGAGGGCA--
 A T G C A C G T A T C G A G T C T A C G T A G C A C G T A T C G A C T G T A C G A C T G A T C G A T G C G T C A C G T A A C T G
A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTGCVVTGGGGGCAAG
-TGCCCTNAGGGCA--
 A T G C A C G T A T C G A G T C T A C G T A G C A C G T A T C G A C T G T A C G A C T G A T C G A T G C G T C A C G T A A C T G
A C G T G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.53
Offset:8
Orientation:forward strand
Alignment:CTGCVVTGGGGGCAAG---
--------AAGGCAAGTGT
 A T G C A C G T A T C G A G T C T A C G T A G C A C G T A T C G A C T G T A C G A C T G A T C G A T G C G T C A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTGCVVTGGGGGCAAG
GCTGTG-----------
 A C G T A T G C A C G T A T C G A G T C T A C G T A G C A C G T A T C G A C T G T A C G A C T G A T C G A T G C G T C A C G T A A C T G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:CTGCVVTGGGGGCAAG
------TNNGGGCAG-
 A T G C A C G T A T C G A G T C T A C G T A G C A C G T A T C G A C T G T A C G A C T G A T C G A T G C G T C A C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.47
Offset:5
Orientation:forward strand
Alignment:CTGCVVTGGGGGCAAG
-----CWGGCGGGAA-
 A T G C A C G T A T C G A G T C T A C G T A G C A C G T A T C G A C T G T A C G A C T G A T C G A T G C G T C A C G T A A C T G
A C G T A C G T A C G T A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.47
Offset:-7
Orientation:forward strand
Alignment:-------CTGCVVTGGGGGCAAG
AATCGCACTGCATTCCG------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T A T C G A G T C T A C G T A G C A C G T A T C G A C T G T A C G A C T G A T C G A T G C G T C A C G T A A C T G
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T A C G T A C G T A C G T A C G T A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:9
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:CTGCVVTGGGGGCAAG
CTTCGCGGGGGGTC--
 A T G C A C G T A T C G A G T C T A C G T A G C A C G T A T C G A C T G T A C G A C T G A T C G A T G C G T C A C G T A A C T G
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C A C G T A C G T

MTF1/MA0863.1/Jaspar

Match Rank:10
Score:0.46
Offset:2
Orientation:reverse strand
Alignment:CTGCVVTGGGGGCAAG
--GTGCCGTGTGCAAA
 A T G C A C G T A T C G A G T C T A C G T A G C A C G T A T C G A C T G T A C G A C T G A T C G A T G C G T C A C G T A A C T G
A C G T A C G T C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A