Information for 3-CCCCTTGCTT (Motif 23)

T G A C A T G C A G T C A T G C A C G T A C G T A T C G A G T C A C G T A G C T
Reverse Opposite:
C T G A T G C A A C T G T A G C C G T A C G T A T A C G A C T G A T C G A C T G
p-value:1e-10
log p-value:-2.463e+01
Information Content per bp:1.840
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.88%
Number of Background Sequences with motif213.3
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets47.3 +/- 25.4bp
Average Position of motif in Background51.5 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCCCTTGCTT-
NNACTTGCCTT
 T G A C A T G C A G T C A T G C A C G T A C G T A T C G A G T C A C G T A G C T A C G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTTGCTT
CGCCCCCTGACA-
 A C G T A C G T A C G T T G A C A T G C A G T C A T G C A C G T A C G T A T C G A G T C A C G T A G C T
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTTGCTT
TTCCCCCTAC---
 A C G T A C G T A C G T T G A C A T G C A G T C A T G C A C G T A C G T A T C G A G T C A C G T A G C T
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTTGCTT-
NNGCACCTTTCTCC
 A C G T A C G T A C G T T G A C A T G C A G T C A T G C A C G T A C G T A T C G A G T C A C G T A G C T A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCCCTTGCTT
-CCTTTGTT-
 T G A C A T G C A G T C A T G C A C G T A C G T A T C G A G T C A C G T A G C T
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTTGCTT-
ACCACATCCTGT
 A C G T T G A C A T G C A G T C A T G C A C G T A C G T A T C G A G T C A C G T A G C T A C G T
T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

SCRT2/MA0744.1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTTGCTT
CCACCTGTTGCAT
 A C G T A C G T A C G T T G A C A T G C A G T C A T G C A C G T A C G T A T C G A G T C A C G T A G C T
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCCCTTGCTT
NCCATTGTTC
 T G A C A T G C A G T C A T G C A C G T A C G T A T C G A G T C A C G T A G C T
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCCCTTGCTT-
-CCATTGTTYB
 T G A C A T G C A G T C A T G C A C G T A C G T A T C G A G T C A C G T A G C T A C G T
A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCCCTTGCTT-
-CCTTTGTTTT
 T G A C A T G C A G T C A T G C A C G T A C G T A T C G A G T C A C G T A G C T A C G T
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T