Information for 12-TTTACCTCAGTCACGC (Motif 22)

C A G T A C G T A C G T G T C A G A T C G T A C C A G T A G T C C G T A A T C G C G A T A G T C C G T A G T A C C T A G A T G C
Reverse Opposite:
A T C G A G T C A C T G A C G T A C T G C G T A A T G C A C G T A C T G G C T A A C T G C A T G A C G T T G C A C G T A G T C A
p-value:1e-10
log p-value:-2.475e+01
Information Content per bp:1.742
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.9 +/- 30.1bp
Average Position of motif in Background65.0 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:TTTACCTCAGTCACGC-----
------SCAGYCADGCATGAC
 C A G T A C G T A C G T G T C A G A T C G T A C C A G T A G T C C G T A A T C G C G A T A G T C C G T A G T A C C T A G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

Pax2/MA0067.1/Jaspar

Match Rank:2
Score:0.62
Offset:8
Orientation:forward strand
Alignment:TTTACCTCAGTCACGC
--------AGTCACGC
 C A G T A C G T A C G T G T C A G A T C G T A C C A G T A G T C C G T A A T C G C G A T A G T C C G T A G T A C C T A G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

FOS::JUN/MA0099.2/Jaspar

Match Rank:3
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:TTTACCTCAGTCACGC
------TGAGTCA---
 C A G T A C G T A C G T G T C A G A T C G T A C C A G T A G T C C G T A A T C G C G A T A G T C C G T A G T A C C T A G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TTTACCTCAGTCACGC---
--GACCACATTCATACAAT
 C A G T A C G T A C G T G T C A G A T C G T A C C A G T A G T C C G T A A T C G C G A T A G T C C G T A G T A C C T A G A T G C A C G T A C G T A C G T
A C G T A C G T T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.59
Offset:6
Orientation:forward strand
Alignment:TTTACCTCAGTCACGC
------CCAATCAA--
 C A G T A C G T A C G T G T C A G A T C G T A C C A G T A G T C C G T A A T C G C G A T A G T C C G T A G T A C C T A G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TTTACCTCAGTCACGC
-TGACAGCTGTCA---
 C A G T A C G T A C G T G T C A G A T C G T A C C A G T A G T C C G T A A T C G C G A T A G T C C G T A G T A C C T A G A T G C
A C G T G C A T C A T G C G T A A T G C T C G A A T C G T G A C A G C T T C A G A G C T A G T C C G T A A C G T A C G T A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TTTACCTCAGTCACGC
-TGACACCTGTCA---
 C A G T A C G T A C G T G T C A G A T C G T A C C A G T A G T C C G T A A T C G C G A T A G T C C G T A G T A C C T A G A T G C
A C G T G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TTTACCTCAGTCACGC
---CCATCAATCAAA-
 C A G T A C G T A C G T G T C A G A T C G T A C C A G T A G T C C G T A A T C G C G A T A G T C C G T A G T A C C T A G A T G C
A C G T A C G T A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T

JUNB/MA0490.1/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TTTACCTCAGTCACGC
-----ATGAGTCATCN
 C A G T A C G T A C G T G T C A G A T C G T A C C A G T A G T C C G T A A T C G C G A T A G T C C G T A G T A C C T A G A T G C
A C G T A C G T A C G T A C G T A C G T T G C A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T G A T C G T A C

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TTTACCTCAGTCACGC
----GATGAGTCAT--
 C A G T A C G T A C G T G T C A G A T C G T A C C A G T A G T C C G T A A T C G C G A T A G T C C G T A G T A C C T A G A T G C
A C G T A C G T A C G T A C G T T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T A C G T A C G T