Information for 1-TTGMATKHATGCT (Motif 2)

A C G T A C G T A C T G G T C A C T G A A C G T A C T G G T A C G T C A A C G T C T A G G T A C C G A T
Reverse Opposite:
C G T A A C T G A G T C C G T A A C G T C A T G G T A C G T C A A G C T A C G T G T A C C G T A G T C A
p-value:1e-14
log p-value:-3.404e+01
Information Content per bp:1.738
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif14.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets57.9 +/- 27.3bp
Average Position of motif in Background53.6 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TTGMATKHATGCT
ACTATGAATGAATGAT
 A C G T A C G T A C G T A C G T A C G T A C T G G T C A C T G A A C G T A C T G G T A C G T C A A C G T C T A G G T A C C G A T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

PB0171.1_Sox18_2/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TTGMATKHATGCT
GGACTGAATTCATGCC
 A C G T A C G T A C G T A C G T A C G T A C T G G T C A C T G A A C G T A C T G G T A C G T C A A C G T C T A G G T A C C G A T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTGMATKHATGCT---
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C T G G T C A C T G A A C G T A C T G G T A C G T C A A C G T C T A G G T A C C G A T A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

PB0068.1_Sox1_1/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TTGMATKHATGCT
NNNTATTGAATTGNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A C T G A A C G T A C T G G T A C G T C A A C G T C T A G G T A C C G A T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTGMATKHATGCT
NNTNTCATGAATGT-
 A C G T A C G T A C G T A C G T A C T G G T C A C T G A A C G T A C T G G T A C G T C A A C G T C T A G G T A C C G A T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TTGMATKHATGCT-
ATGAATAATTAATG
 A C G T A C G T A C T G G T C A C T G A A C G T A C T G G T A C G T C A A C G T C T A G G T A C C G A T A C G T
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G

POU4F3/MA0791.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTGMATKHATGCT---
ATGCATAATTAATGAG
 A C G T A C G T A C T G G T C A C T G A A C G T A C T G G T A C G T C A A C G T C T A G G T A C C G A T A C G T A C G T A C G T
C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G

HOXA5/MA0158.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TTGMATKHATGCT
---AATTAGTG--
 A C G T A C G T A C T G G T C A C T G A A C G T A C T G G T A C G T C A A C G T C T A G G T A C C G A T
A C G T A C G T A C G T T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TTGMATKHATGCT
TTCATTTGCATAT-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A C T G A A C G T A C T G G T A C G T C A A C G T C T A G G T A C C G A T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T

PH0095.1_Lhx5/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TTGMATKHATGCT
ANNATTTAATTAATTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A C T G A A C G T A C T G G T A C G T C A A C G T C T A G G T A C C G A T
T C G A C A T G C A G T C G T A C G A T G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T C A G T G A T C A T C G