Information for 11-YGGTRCTGCGAGGCGT (Motif 19)

A G C T A C T G A C T G A C G T C T A G A G T C A C G T A C T G A T G C T C A G C G T A A C T G A T C G A G T C A T C G A G C T
Reverse Opposite:
C T G A A T G C T A C G A T G C A G T C A C G T A G T C A T C G A G T C C G T A A C T G A G T C G T C A A G T C A G T C C T G A
p-value:1e-11
log p-value:-2.540e+01
Information Content per bp:1.798
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.4 +/- 28.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:YGGTRCTGCGAGGCGT
-GGTGYTGACAGS---
 A G C T A C T G A C T G A C G T C T A G A G T C A C G T A C T G A T G C T C A G C G T A A C T G A T C G A G T C A T C G A G C T
A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.54
Offset:5
Orientation:forward strand
Alignment:YGGTRCTGCGAGGCGT
-----TTGCCAAG---
 A G C T A C T G A C T G A C G T C T A G A G T C A C G T A C T G A T G C T C A G C G T A A C T G A T C G A G T C A T C G A G C T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.51
Offset:1
Orientation:forward strand
Alignment:YGGTRCTGCGAGGCGT
-NATGTTGCAA-----
 A G C T A C T G A C T G A C G T C T A G A G T C A C G T A C T G A T G C T C A G C G T A A C T G A T C G A G T C A T C G A G C T
A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:YGGTRCTGCGAGGCGT
NNGCNCTGCGCGGC--
 A G C T A C T G A C T G A C G T C T A G A G T C A C G T A C T G A T G C T C A G C G T A A C T G A T C G A G T C A T C G A G C T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:5
Score:0.51
Offset:6
Orientation:forward strand
Alignment:YGGTRCTGCGAGGCGT--
------TGTCAGGGGGCG
 A G C T A C T G A C T G A C G T C T A G A G T C A C G T A C T G A T G C T C A G C G T A A C T G A T C G A G T C A T C G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:YGGTRCTGCGAGGCGT
----VBTGWCAGCB--
 A G C T A C T G A C T G A C G T C T A G A G T C A C G T A C T G A T G C T C A G C G T A A C T G A T C G A G T C A T C G A G C T
A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.49
Offset:4
Orientation:forward strand
Alignment:YGGTRCTGCGAGGCGT
----GCTGTG------
 A G C T A C T G A C T G A C G T C T A G A G T C A C G T A C T G A T G C T C A G C G T A A C T G A T C G A G T C A T C G A G C T
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:8
Score:0.49
Offset:6
Orientation:forward strand
Alignment:YGGTRCTGCGAGGCGT--
------TGACAGGTGTCA
 A G C T A C T G A C T G A C G T C T A G A G T C A C G T A C T G A T G C T C A G C G T A A C T G A T C G A G T C A T C G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A

POL002.1_INR/Jaspar

Match Rank:9
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:YGGTRCTGCGAGGCGT
-NNNANTGA-------
 A G C T A C T G A C T G A C G T C T A G A G T C A C G T A C T G A T G C T C A G C G T A A C T G A T C G A G T C A T C G A G C T
A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.48
Offset:-10
Orientation:reverse strand
Alignment:----------YGGTRCTGCGAGGCGT
TGGCCANNNNNGGAACTGCA------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G A C T G A C G T C T A G A G T C A C G T A C T G A T G C T C A G C G T A A C T G A T C G A G T C A T C G A G C T
G C A T C T A G C A T G G A T C G A T C C T G A G A T C G C A T A C T G A G C T C A G T C T A G C A T G G C T A C G T A A G T C C G A T C T A G A T G C G C T A A C G T A C G T A C G T A C G T A C G T A C G T