Information for 10-CTTGGCTCTGCCCWTG (Motif 17)

A T G C A G C T C G A T A C T G A C T G A G T C C G A T A G T C C G A T C T A G G T A C A T G C G T A C G C T A C G A T C A T G
Reverse Opposite:
G A T C C G T A C G A T A C T G T A C G C A T G A G T C C G T A C T A G C G T A C T A G G T A C T G A C C G T A C T G A A T C G
p-value:1e-11
log p-value:-2.620e+01
Information Content per bp:1.697
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif21.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets40.2 +/- 24.7bp
Average Position of motif in Background57.2 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTTGGCTCTGCCCWTG
NTTGGCANN-------
 A T G C A G C T C G A T A C T G A C T G A G T C C G A T A G T C C G A T C T A G G T A C A T G C G T A C G C T A C G A T C A T G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTTGGCTCTGCCCWTG
NNTTGGCANN-------
 A C G T A T G C A G C T C G A T A C T G A C T G A G T C C G A T A G T C C G A T C T A G G T A C A T G C G T A C G C T A C G A T C A T G
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTTGGCTCTGCCCWTG
-TTGGCA---------
 A T G C A G C T C G A T A C T G A C T G A G T C C G A T A G T C C G A T C T A G G T A C A T G C G T A C G C T A C G A T C A T G
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTTGGCTCTGCCCWTG
CTTGGCANNNTGCCAA
 A T G C A G C T C G A T A C T G A C T G A G T C C G A T A G T C C G A T C T A G G T A C A T G C G T A C G C T A C G A T C A T G
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

PB0040.1_Lef1_1/Jaspar

Match Rank:5
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----CTTGGCTCTGCCCWTG
AATCCCTTTGATCTATC----
 A C G T A C G T A C G T A C G T A C G T A T G C A G C T C G A T A C T G A C T G A G T C C G A T A G T C C G A T C T A G G T A C A T G C G T A C G C T A C G A T C A T G
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C A C G T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CTTGGCTCTGCCCWTG
TNCCTTTGATGT-------
 A C G T A C G T A C G T A T G C A G C T C G A T A C T G A C T G A G T C C G A T A G T C C G A T C T A G G T A C A T G C G T A C G C T A C G A T C A T G
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CTTGGCTCTGCCCWTG---
---GGGTGTGCCCAAAAGG
 A T G C A G C T C G A T A C T G A C T G A G T C C G A T A G T C C G A T C T A G G T A C A T G C G T A C G C T A C G A T C A T G A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CTTGGCTCTGCCCWTG
YCTTTGTTCC-------
 A C G T A T G C A G C T C G A T A C T G A C T G A G T C C G A T A G T C C G A T C T A G G T A C A T G C G T A C G C T A C G A T C A T G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:CTTGGCTCTGCCCWTG-
-------CTGACCTTTG
 A T G C A G C T C G A T A C T G A C T G A G T C C G A T A G T C C G A T C T A G G T A C A T G C G T A C G C T A C G A T C A T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CTTGGCTCTGCCCWTG
-TGACCTTTGCCCTA-
 A T G C A G C T C G A T A C T G A C T G A G T C C G A T A G T C C G A T C T A G G T A C A T G C G T A C G C T A C G A T C A T G
A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T