Information for 7-GTCACCTCACACA (Motif 16)

A C T G A G C T A T G C C G T A A T G C A G T C A C G T A G T C G T C A A G T C C G T A G A T C C G T A
Reverse Opposite:
A C G T C A T G C G A T C T A G A C G T C T A G T G C A C T A G A T C G A C G T A T C G C T G A A G T C
p-value:1e-11
log p-value:-2.625e+01
Information Content per bp:1.809
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif29.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets45.5 +/- 25.1bp
Average Position of motif in Background55.5 +/- 35.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.36
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF1/MA0595.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GTCACCTCACACA
ATCACCCCAC---
 A C T G A G C T A T G C C G T A A T G C A G T C A C G T A G T C G T C A A G T C C G T A G A T C C G T A
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTCACCTCACACA
ATCACCCCAT---
 A C T G A G C T A T G C C G T A A T G C A G T C A C G T A G T C G T C A A G T C C G T A G A T C C G T A
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GTCACCTCACACA
CNGTCACGCCAC---
 A C G T A C G T A C T G A G C T A T G C C G T A A T G C A G T C A C G T A G T C G T C A A G T C C G T A G A T C C G T A
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTCACCTCACACA
ATCACCCCAT---
 A C T G A G C T A T G C C G T A A T G C A G T C A C G T A G T C G T C A A G T C C G T A G A T C C G T A
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTCACCTCACACA
CGGTGACGTCAC---
 A C G T A C G T A C T G A G C T A T G C C G T A A T G C A G T C A C G T A G T C G T C A A G T C C G T A G A T C C G T A
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GTCACCTCACACA
TGTCGTGACCCCTTAAT
 A C G T A C G T A C G T A C G T A C T G A G C T A T G C C G T A A T G C A G T C A C G T A G T C G T C A A G T C C G T A G A T C C G T A
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTCACCTCACACA-----
--AGCGGCACACACGCAA
 A C T G A G C T A T G C C G T A A T G C A G T C A C G T A G T C G T C A A G T C C G T A G A T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GTCACCTCACACA-----
--CGAAGCACACAAAATA
 A C T G A G C T A T G C C G T A A T G C A G T C A C G T A G T C G T C A A G T C C G T A G A T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0025.1_Glis2_1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTCACCTCACACA-
TATCGACCCCCCACAG
 A C G T A C G T A C T G A G C T A T G C C G T A A T G C A G T C A C G T A G T C G T C A A G T C C G T A G A T C C G T A A C G T
G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G

RUNX3/MA0684.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTCACCTCACACA
-AAACCGCAAA--
 A C T G A G C T A T G C C G T A A T G C A G T C A C G T A G T C G T C A A G T C C G T A G A T C C G T A
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T