Information for 3-CAKTTGAGAAGWCACA (Motif 8)

A T G C C G T A A C G T A C G T C A G T A C T G C G T A C T A G C T G A G T C A A C T G G C T A A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T T C A G A C G T A C T G C G A T G T A C A C G T A G C T A G T C C G A T G T A C G T C A T C G A G T C A A C G T A T C G
p-value:1e-12
log p-value:-2.838e+01
Information Content per bp:1.737
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif9.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets61.2 +/- 28.8bp
Average Position of motif in Background48.7 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CAKTTGAGAAGWCACA
-----TCCAATCCACA
 A T G C C G T A A C G T A C G T C A G T A C T G C G T A C T A G C T G A G T C A A C T G G C T A A G T C C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CAKTTGAGAAGWCACA
------AAAAGTCAA-
 A T G C C G T A A C G T A C G T C A G T A C T G C G T A C T A G C T G A G T C A A C T G G C T A A G T C C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CAKTTGAGAAGWCACA--
------SSAATCCACANN
 A T G C C G T A A C G T A C G T C A G T A C T G C G T A C T A G C T G A G T C A A C T G G C T A A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:CAKTTGAGAAGWCACA---
--------AAACCACAGAN
 A T G C C G T A A C G T A C G T C A G T A C T G C G T A C T A G C T G A G T C A A C T G G C T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

PH0037.1_Hdx/Jaspar

Match Rank:5
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CAKTTGAGAAGWCACA---
--AAGGCGAAATCATCGCA
 A T G C C G T A A C G T A C G T C A G T A C T G C G T A C T A G C T G A G T C A A C T G G C T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

PB0004.1_Atf1_1/Jaspar

Match Rank:6
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CAKTTGAGAAGWCACA--
--NCGATGACGTCATCGN
 A T G C C G T A A C G T A C G T C A G T A C T G C G T A C T A G C T G A G T C A A C T G G C T A A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T G A C T G A T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C T C A G G A C T

PB0203.1_Zfp691_2/Jaspar

Match Rank:7
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CAKTTGAGAAGWCACA--
-NTNNNAGGAGTCTCNTN
 A T G C C G T A A C G T A C G T C A G T A C T G C G T A C T A G C T G A G T C A A C T G G C T A A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

PB0118.1_Esrra_2/Jaspar

Match Rank:8
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CAKTTGAGAAGWCACA---
--GGCGAGGGGTCAAGGGC
 A T G C C G T A A C G T A C G T C A G T A C T G C G T A C T A G C T G A G T C A A C T G G C T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.49
Offset:8
Orientation:forward strand
Alignment:CAKTTGAGAAGWCACA--
--------AAACCACANN
 A T G C C G T A A C G T A C G T C A G T A C T G C G T A C T A G C T G A G T C A A C T G G C T A A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:10
Score:0.48
Offset:0
Orientation:forward strand
Alignment:CAKTTGAGAAGWCACA
GAGGTCAAAGGTCA--
 A T G C C G T A A C G T A C G T C A G T A C T G C G T A C T A G C T G A G T C A A C T G G C T A A G T C C G T A A G T C C G T A
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T A C G T