Information for 7-ATCCACCAAA (Motif 25)

C G T A A C G T A G T C A G T C G T C A A G T C A G T C C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C T G A C T G A C G T A C T G A C T G C G T A A C G T
p-value:1e-5
log p-value:-1.311e+01
Information Content per bp:1.963
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif16.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets57.2 +/- 26.7bp
Average Position of motif in Background49.0 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ATCCACCAAA
ATCCAC----
 C G T A A C G T A G T C A G T C G T C A A G T C A G T C C G T A C G T A C G T A
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATCCACCAAA
CCATCAATCAAA
 A C G T A C G T C G T A A C G T A G T C A G T C G T C A A G T C A G T C C G T A C G T A C G T A
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATCCACCAAA
SSAATCCACANN-
 A C G T A C G T A C G T C G T A A C G T A G T C A G T C G T C A A G T C A G T C C G T A C G T A C G T A
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATCCACCAAA-----
TCACCCATCAATAAACA
 A C G T A C G T C G T A A C G T A G T C A G T C G T C A A G T C A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ATCCACCAAA
GYCATCMATCAT-
 A C G T A C G T A C G T C G T A A C G T A G T C A G T C G T C A A G T C A G T C C G T A C G T A C G T A
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T

ZBTB7B/MA0694.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATCCACCAAA
GCGACCACCGAA
 A C G T A C G T C G T A A C G T A G T C A G T C G T C A A G T C A G T C C G T A C G T A C G T A
C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ATCCACCAAA---
AAGCCCCCCAAAAAT
 A C G T A C G T C G T A A C G T A G T C A G T C G T C A A G T C A G T C C G T A C G T A C G T A A C G T A C G T A C G T
C T G A C T G A T C A G T A G C T A G C G T A C G T A C A G T C G A T C G C T A G C T A G C T A C G T A G T C A A G C T

ZBTB7C/MA0695.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ATCCACCAAA
GCGACCACCGAA
 A C G T A C G T C G T A A C G T A G T C A G T C G T C A A G T C A G T C C G T A C G T A C G T A
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----ATCCACCAAA
TCCAATCCACA---
 A C G T A C G T A C G T A C G T C G T A A C G T A G T C A G T C G T C A A G T C A G T C C G T A C G T A C G T A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T

PH0122.1_Obox2/Jaspar

Match Rank:10
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------ATCCACCAAA
ATAGTTAATCCCCCTCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C A G T C G T C A A G T C A G T C C G T A C G T A C G T A
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G C T A C A G T G T A C A G T C G A T C G A T C G A T C A G C T T G A C G C T A