Information for 2-CAAAAGGTAT (Motif 11)

T A G C G T C A C T G A C T G A C T G A A C T G T A C G A G C T C T G A A G C T
Reverse Opposite:
T C G A A G C T C T G A A G T C A G T C A G C T A G C T A G C T A C G T A T C G
p-value:1e-11
log p-value:-2.587e+01
Information Content per bp:1.833
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.31%
Number of Background Sequences with motif84.5
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets58.6 +/- 22.9bp
Average Position of motif in Background47.3 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT1/MA0743.1/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CAAAAGGTAT--
GAGCAACAGGTGGTT
 A C G T A C G T A C G T T A G C G T C A C T G A C T G A C T G A A C T G T A C G A G C T C T G A A G C T A C G T A C G T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

SCRT2/MA0744.1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CAAAAGGTAT
ATGCAACAGGTGG
 A C G T A C G T A C G T T A G C G T C A C T G A C T G A C T G A A C T G T A C G A G C T C T G A A G C T
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

HLTF/MA0109.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CAAAAGGTAT
NNATAAGGNN-
 A C G T T A G C G T C A C T G A C T G A C T G A A C T G T A C G A G C T C T G A A G C T
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CAAAAGGTAT---
--AAGGATATNTN
 T A G C G T C A C T G A C T G A C T G A A C T G T A C G A G C T C T G A A G C T A C G T A C G T A C G T
A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

PB0059.1_Six6_1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAAAAGGTAT-------
AATAGGGTATCATATAT
 T A G C G T C A C T G A C T G A C T G A A C T G T A C G A G C T C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

Six3/MA0631.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAAAAGGTAT-------
GATAGGGTATCACTAAT
 T A G C G T C A C T G A C T G A C T G A A C T G T A C G A G C T C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAAAAGGTAT-------
GATAGGGTATCACTAAT
 T A G C G T C A C T G A C T G A C T G A A C T G T A C G A G C T C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0161.1_Six1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAAAAGGTAT-------
GATGGGGTATCATTTTT
 T A G C G T C A C T G A C T G A C T G A A C T G T A C G A G C T C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

Rarg/MA0859.1/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CAAAAGGTAT-
AAGGTCAAAAGGTCAA
 A C G T A C G T A C G T A C G T A C G T T A G C G T C A C T G A C T G A C T G A A C T G T A C G A G C T C T G A A G C T A C G T
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

PH0166.1_Six6_2/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAAAAGGTAT-------
AATAGGGTATCAATATT
 T A G C G T C A C T G A C T G A C T G A A C T G T A C G A G C T C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T