Information for 1-AGAAGGCTTG (Motif 4)

C G T A A C T G C T G A C G T A A C T G A T C G G T A C A C G T A C G T A C T G
Reverse Opposite:
G T A C C G T A C G T A C A T G A T G C A G T C A C G T A G C T A G T C A C G T
p-value:1e-8
log p-value:-1.938e+01
Information Content per bp:1.880
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif8.45%
Number of Background Sequences with motif84.6
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets50.7 +/- 30.0bp
Average Position of motif in Background46.9 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGAAGGCTTG
NGAAGC----
 C G T A A C T G C T G A C G T A A C T G A T C G G T A C A C G T A C G T A C T G
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

PROX1/MA0794.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGAAGGCTTG
TAAGGCGTCTTG
 A C G T A C G T C G T A A C T G C T G A C G T A A C T G A T C G G T A C A C G T A C G T A C T G
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AGAAGGCTTG
---AAGCTTG
 C G T A A C T G C T G A C G T A A C T G A T C G G T A C A C G T A C G T A C T G
A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGAAGGCTTG-
---AGGCCTNG
 C G T A A C T G C T G A C G T A A C T G A T C G G T A C A C G T A C G T A C T G A C G T
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGAAGGCTTG-----
CAAAGGCGTGGCCAG
 C G T A A C T G C T G A C G T A A C T G A T C G G T A C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

HLTF/MA0109.1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AGAAGGCTTG
NNATAAGGNN--
 A C G T A C G T C G T A A C T G C T G A C G T A A C T G A T C G G T A C A C G T A C G T A C T G
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AGAAGGCTTG
AACAGATGGC---
 A C G T A C G T A C G T C G T A A C T G C T G A C G T A A C T G A T C G G T A C A C G T A C G T A C T G
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGAAGGCTTG-
AAGAGGATTAG
 C G T A A C T G C T G A C G T A A C T G A T C G G T A C A C G T A C G T A C T G A C G T
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGAAGGCTTG
--NGGGATTA
 C G T A A C T G C T G A C G T A A C T G A T C G G T A C A C G T A C G T A C T G
A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

PH0137.1_Pitx1/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AGAAGGCTTG-----
TTAGAGGGATTAACAAT
 A C G T A C G T C G T A A C T G C T G A C G T A A C T G A T C G G T A C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T