Information for 2-GVGAATAGTGTCADDG (Motif 3)

A C T G T A C G A C T G C G T A C G T A C G A T C G T A A C T G A C G T C T A G A C G T A T G C G T C A C A G T C G T A A C T G
Reverse Opposite:
A G T C G A C T G A C T A C G T A T C G C G T A A G T C G T C A G T A C C G A T C G T A A C G T A C G T A G T C A G T C A G T C
p-value:1e-10
log p-value:-2.492e+01
Information Content per bp:1.747
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif5.63%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.4 +/- 28.5bp
Average Position of motif in Background57.7 +/- 9.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GVGAATAGTGTCADDG
CSTGGGAAAD---------
 A C G T A C G T A C G T A C T G T A C G A C T G C G T A C G T A C G A T C G T A A C T G A C G T C T A G A C G T A T G C G T C A C A G T C G T A A C T G
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GVGAATAGTGTCADDG
GNNACCGAGAATNNN-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A C G A C T G C G T A C G T A C G A T C G T A A C T G A C G T C T A G A C G T A T G C G T C A C A G T C G T A A C T G
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:3
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GVGAATAGTGTCADDG
TGGCGGGAAAHB--------
 A C G T A C G T A C G T A C G T A C T G T A C G A C T G C G T A C G T A C G A T C G T A A C T G A C G T C T A G A C G T A T G C G T C A C A G T C G T A A C T G
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------GVGAATAGTGTCADDG
TTGACCGAGAATTCC-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A C G A C T G C G T A C G T A C G A T C G T A A C T G A C G T C T A G A C G T A T G C G T C A C A G T C G T A A C T G
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:5
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----GVGAATAGTGTCADDG
CWGGCGGGAA-----------
 A C G T A C G T A C G T A C G T A C G T A C T G T A C G A C T G C G T A C G T A C G A T C G T A A C T G A C G T C T A G A C G T A T G C G T C A C A G T C G T A A C T G
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:6
Score:0.49
Offset:3
Orientation:forward strand
Alignment:GVGAATAGTGTCADDG
---AAYTAGGTCA---
 A C T G T A C G A C T G C G T A C G T A C G A T C G T A A C T G A C G T C T A G A C G T A T G C G T C A C A G T C G T A A C T G
A C G T A C G T A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:7
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GVGAATAGTGTCADDG
GGGAATTGTAGT----
 A C T G T A C G A C T G C G T A C G T A C G A T C G T A A C T G A C G T C T A G A C G T A T G C G T C A C A G T C G T A A C T G
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:8
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-GVGAATAGTGTCADDG
GGAGAAAGGTGCGA---
 A C G T A C T G T A C G A C T G C G T A C G T A C G A T C G T A A C T G A C G T C T A G A C G T A T G C G T C A C A G T C G T A A C T G
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T A C G T A C G T

PB0177.1_Sox7_2/Jaspar

Match Rank:9
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--GVGAATAGTGTCADDG----
GTGCTAATTGTGTGTGTACGCT
 A C G T A C G T A C T G T A C G A C T G C G T A C G T A C G A T C G T A A C T G A C G T C T A G A C G T A T G C G T C A C A G T C G T A A C T G A C G T A C G T A C G T A C G T
A C T G C G A T T A C G A T G C C G A T G T C A C G T A G C A T G C A T T C A G G C A T T A C G G A C T T A C G G C A T T C A G A C G T C T G A G A T C A C T G T A G C A G C T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---GVGAATAGTGTCADDG
GGCGGGAARN---------
 A C G T A C G T A C G T A C T G T A C G A C T G C G T A C G T A C G A T C G T A A C T G A C G T C T A G A C G T A T G C G T C A C A G T C G T A A C T G
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T