Information for 1-TTTCCGAGATGCTAWT (Motif 1)

A C G T A C G T C G A T A G T C A G T C A C T G C G T A C T A G C G T A A C G T C T A G A G T C C A G T C T G A C G T A G A C T
Reverse Opposite:
C G T A C G A T A G C T G C T A C T A G A G T C C G T A A C G T A G T C A C G T G T A C C T A G C T A G C G T A C G T A C G T A
p-value:1e-14
log p-value:-3.403e+01
Information Content per bp:1.767
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif7.04%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.8 +/- 22.7bp
Average Position of motif in Background56.2 +/- 8.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0048.1_Hoxa13/Jaspar

Match Rank:1
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TTTCCGAGATGCTAWT
ANATTTTACGAGNNNN----
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G T C A G T C A C T G C G T A C T A G C G T A A C G T C T A G A G T C C A G T C T G A C G T A G A C T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T A C G T A C G T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTTCCGAGATGCTAWT
NTTTTACGAGN-------
 A C G T A C G T A C G T A C G T C G A T A G T C A G T C A C T G C G T A C T A G C G T A A C G T C T A G A G T C C A G T C T G A C G T A G A C T
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TTTCCGAGATGCTAWT
NAATTTTACGAGNTNN----
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G T C A G T C A C T G C G T A C T A G C G T A A C G T C T A G A G T C C A G T C T G A C G T A G A C T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T A C G T A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTTCCGAGATGCTAWT
ATTTCCAAGAA------
 A C G T A C G T A C G T C G A T A G T C A G T C A C T G C G T A C T A G C G T A A C G T C T A G A G T C C A G T C T G A C G T A G A C T
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTTCCGAGATGCTAWT
NTTTCTNAGAAA-----
 A C G T A C G T A C G T C G A T A G T C A G T C A C T G C G T A C T A G C G T A A C G T C T A G A G T C C A G T C T G A C G T A G A C T
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T A C G T A C G T A C G T A C G T

PB0125.1_Gata3_2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTTCCGAGATGCTAWT------
TTTTGTAGATTTTATCGACTTA
 A C G T A C G T C G A T A G T C A G T C A C T G C G T A C T A G C G T A A C G T C T A G A G T C C A G T C T G A C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A C G T G C A T C A G T T C A G A G C T G C T A C T A G G C T A G A C T C G A T A C G T G A C T C T G A A C G T G A T C C T A G T C G A A T G C C G A T G C A T G T C A

STAT3/MA0144.2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTTCCGAGATGCTAWT
TTTCCCAGAAN-----
 A C G T A C G T C G A T A G T C A G T C A C T G C G T A C T A G C G T A A C G T C T A G A G T C C A G T C T G A C G T A G A C T
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.55
Offset:7
Orientation:forward strand
Alignment:TTTCCGAGATGCTAWT---
-------TATGCWAATBAV
 A C G T A C G T C G A T A G T C A G T C A C T G C G T A C T A G C G T A A C G T C T A G A G T C C A G T C T G A C G T A G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

STAT1/MA0137.3/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTTCCGAGATGCTAWT
TTTCCTGGAAA-----
 A C G T A C G T C G A T A G T C A G T C A C T G C G T A C T A G C G T A A C G T C T A G A G T C C A G T C T G A C G T A G A C T
G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TTTCCGAGATGCTAWT
---TCCAGATGTT---
 A C G T A C G T C G A T A G T C A G T C A C T G C G T A C T A G C G T A A C G T C T A G A G T C C A G T C T G A C G T A G A C T
A C G T A C G T A C G T A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T A C G T A C G T A C G T