Information for 3-MGTTCAATATWGT (Motif 7)

G T C A A C T G A C G T A C G T A G T C G T C A C G T A A C G T C G T A A C G T C G A T A C T G A G C T
Reverse Opposite:
C T G A A G T C C G T A C G T A A C G T C G T A C G A T A C G T A C T G G T C A C G T A A G T C A C G T
p-value:1e-10
log p-value:-2.383e+01
Information Content per bp:1.912
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.5 +/- 22.0bp
Average Position of motif in Background42.7 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-MGTTCAATATWGT
NNTNNCAATATTAG
 A C G T G T C A A C T G A C G T A C G T A G T C G T C A C G T A A C G T C G T A A C G T C G A T A C T G A G C T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-MGTTCAATATWGT
NNTNNCAATATTAG
 A C G T G T C A A C T G A C G T A C G T A G T C G T C A C G T A A C G T C G T A A C G T C G A T A C T G A G C T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0197.1_Zfp105_2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--MGTTCAATATWGT--
ATGGTTCAATAATTTTG
 A C G T A C G T G T C A A C T G A C G T A C G T A G T C G T C A C G T A A C G T C G T A A C G T C G A T A C T G A G C T A C G T A C G T
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G

PB0068.1_Sox1_1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----MGTTCAATATWGT
AATCAATTCAATAATT-
 A C G T A C G T A C G T A C G T G T C A A C T G A C G T A C G T A G T C G T C A C G T A A C G T C G T A A C G T C G A T A C T G A G C T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T A C G T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:MGTTCAATATWGT
DGATCRATAN---
 G T C A A C T G A C G T A C G T A G T C G T C A C G T A A C G T C G T A A C G T C G A T A C T G A G C T
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C A C G T A C G T A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-MGTTCAATATWGT-
TAATTCAATGAAGTG
 A C G T G T C A A C T G A C G T A C G T A G T C G T C A C G T A A C G T C G T A A C G T C G A T A C T G A G C T A C G T
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--MGTTCAATATWGT
HNRAATCAAT-----
 A C G T A C G T G T C A A C T G A C G T A C G T A G T C G T C A C G T A A C G T C G T A A C G T C G A T A C T G A G C T
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:MGTTCAATATWGT-
-----CTCATTGTC
 G T C A A C T G A C G T A C G T A G T C G T C A C G T A A C G T C G T A A C G T C G A T A C T G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

PB0090.1_Zbtb12_1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----MGTTCAATATWGT
CTAAGGTTCTAGATCAC
 A C G T A C G T A C G T A C G T G T C A A C T G A C G T A C G T A G T C G T C A C G T A A C G T C G T A A C G T C G A T A C T G A G C T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:MGTTCAATATWGT------
---AANTTATTGTTCTNNA
 G T C A A C T G A C G T A C G T A G T C G T C A C G T A A C G T C G T A A C G T C G A T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A