Information for 2-ATTAACATTATTT (Motif 5)

C G T A C G A T A C G T C T G A C G T A A T G C C G T A A C G T C G A T C G T A A C G T A G C T A C G T
Reverse Opposite:
G T C A C T G A C G T A A C G T C G T A C G T A A C G T A T C G A C G T A G C T C G T A C G T A A C G T
p-value:1e-10
log p-value:-2.516e+01
Information Content per bp:1.896
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.3 +/- 30.2bp
Average Position of motif in Background42.7 +/- 11.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU3F3/MA0788.1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ATTAACATTATTT
AAATTAGCATAAT--
 A C G T A C G T C G T A C G A T A C G T C T G A C G T A A T G C C G T A A C G T C G A T C G T A A C G T A G C T A C G T
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ATTAACATTATTT
TAATTTGCATAA---
 A C G T A C G T C G T A C G A T A C G T C T G A C G T A A T G C C G T A A C G T C G A T C G T A A C G T A G C T A C G T
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ATTAACATTATTT
BTVATTWGCATA----
 A C G T A C G T A C G T C G T A C G A T A C G T C T G A C G T A A T G C C G T A A C G T C G A T C G T A A C G T A G C T A C G T
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATTAACATTATTT
AATTTGCATANT--
 A C G T C G T A C G A T A C G T C T G A C G T A A T G C C G T A A C G T C G A T C G T A A C G T A G C T A C G T
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T A C G T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATTAACATTATTT
TAATTTGCATAA---
 A C G T A C G T C G T A C G A T A C G T C T G A C G T A A T G C C G T A A C G T C G A T C G T A A C G T A G C T A C G T
C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A A C G T A C G T A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ATTAACATTATTT
CTAATTTGCATATT--
 A C G T A C G T A C G T C G T A C G A T A C G T C T G A C G T A A T G C C G T A A C G T C G A T C G T A A C G T A G C T A C G T
G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ATTAACATTATTT
NTAATTAATAT-----
 A C G T A C G T A C G T C G T A C G A T A C G T C T G A C G T A A T G C C G T A A C G T C G A T C G T A A C G T A G C T A C G T
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATTAACATTATTT
AACAATAACATTGTT-
 A C G T A C G T A C G T C G T A C G A T A C G T C T G A C G T A A T G C C G T A A C G T C G A T C G T A A C G T A G C T A C G T
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATTAACATTATTT
CTCATTTGCATW----
 A C G T A C G T A C G T C G T A C G A T A C G T C T G A C G T A A T G C C G T A A C G T C G A T C G T A A C G T A G C T A C G T
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATTAACATTATTT
ATTTGCATA----
 C G T A C G A T A C G T C T G A C G T A A T G C C G T A A C G T C G A T C G T A A C G T A G C T A C G T
G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T A C G T A C G T A C G T