Information for 7-CTGACTGGAGAMAATT (Motif 9)

G A T C A C G T T C A G G T C A G T A C C G A T C A T G A C T G C G T A A T C G T C G A T G A C C T G A T C G A C A G T C A G T
Reverse Opposite:
G T C A G T C A A G C T G A C T A C T G A G C T T A G C G C A T T A G C G T A C C G T A C A T G C A G T A G T C G T C A C A T G
p-value:1e-10
log p-value:-2.339e+01
Information Content per bp:1.596
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.74%
Number of Background Sequences with motif327.5
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets47.7 +/- 27.4bp
Average Position of motif in Background48.5 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PKNOX2/MA0783.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTGACTGGAGAMAATT
-TGACAGGTGTCA---
 G A T C A C G T T C A G G T C A G T A C C G A T C A T G A C T G C G T A A T C G T C G A T G A C C T G A T C G A C A G T C A G T
A C G T C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A A C G T A C G T A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTGACTGGAGAMAATT
-TGACAGGTGTCA---
 G A T C A C G T T C A G G T C A G T A C C G A T C A T G A C T G C G T A A T C G T C G A T G A C C T G A T C G A C A G T C A G T
A C G T G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A A C G T A C G T A C G T

TGIF2/MA0797.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTGACTGGAGAMAATT
-TGACAGCTGTCA---
 G A T C A C G T T C A G G T C A G T A C C G A T C A T G A C T G C G T A A T C G T C G A T G A C C T G A T C G A C A G T C A G T
A C G T G C A T C T A G C T G A G A T C C T G A C A T G T A G C G A C T C T A G G A C T A T G C C G T A A C G T A C G T A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTGACTGGAGAMAATT
-TGACAGCTGTCA---
 G A T C A C G T T C A G G T C A G T A C C G A T C A T G A C T G C G T A A T C G T C G A T G A C C T G A T C G A C A G T C A G T
A C G T G C A T T C A G T C G A A G T C T C G A A C T G T A G C A G C T T A C G G C A T G T A C C G T A A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTGACTGGAGAMAATT
-TGTCAGGGGGCG---
 G A T C A C G T T C A G G T C A G T A C C G A T C A T G A C T G C G T A A T C G T C G A T G A C C T G A T C G A C A G T C A G T
A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTGACTGGAGAMAATT
-TGATTGGCTANN---
 G A T C A C G T T C A G G T C A G T A C C G A T C A T G A C T G C G T A A T C G T C G A T G A C C T G A T C G A C A G T C A G T
A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTGACTGGAGAMAATT
TTGATTGN--------
 G A T C A C G T T C A G G T C A G T A C C G A T C A T G A C T G C G T A A T C G T C G A T G A C C T G A T C G A C A G T C A G T
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CTGACTGGAGAMAATT
TTGACAGC--------
 G A T C A C G T T C A G G T C A G T A C C G A T C A T G A C T G C G T A A T C G T C G A T G A C C T G A T C G A C A G T C A G T
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:9
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------CTGACTGGAGAMAATT
AGAGTGCTGATTGGTCCA----
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T T C A G G T C A G T A C C G A T C A T G A C T G C G T A A T C G T C G A T G A C C T G A T C G A C A G T C A G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CTGACTGGAGAMAATT
NNTNNTGTCTGGNNTNG---
 A C G T A C G T A C G T A C G T G A T C A C G T T C A G G T C A G T A C C G A T C A T G A C T G C G T A A T C G T C G A T G A C C T G A T C G A C A G T C A G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T A C G T A C G T