Information for 4-GATGGCAAGATTA (Motif 17)

A C T G C G T A A C G T A C T G A T C G A G T C C G T A C G T A A C T G C G T A C G A T A C G T C G T A
Reverse Opposite:
C G A T C G T A C G T A A C G T A G T C C G A T A C G T A C T G A T G C A G T C C G T A A C G T A G T C
p-value:1e-8
log p-value:-2.072e+01
Information Content per bp:1.935
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.2 +/- 29.7bp
Average Position of motif in Background8.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GATGGCAAGATTA-
AGATGKDGAGATAAG
 A C G T A C T G C G T A A C G T A C T G A T C G A G T C C G T A C G T A A C T G C G T A C G A T A C G T C G T A A C G T
C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GATGGCAAGATTA
GGTTGGCAT-----
 A C G T A C T G C G T A A C G T A C T G A T C G A G T C C G T A C G T A A C T G C G T A C G A T A C G T C G T A
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GATGGCAAGATTA
NGTAGGTTGGCATNNN--
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G A T C G A G T C C G T A C G T A A C T G C G T A C G A T A C G T C G T A
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GATGGCAAGATTA-
NNTNNCAATATTAG
 A C T G C G T A A C G T A C T G A T C G A G T C C G T A C G T A A C T G C G T A C G A T A C G T C G T A A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GATGGCAAGATTA-
NNTNNCAATATTAG
 A C T G C G T A A C G T A C T G A T C G A G T C C G T A C G T A A C T G C G T A C G A T A C G T C G T A A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0185.1_Tcf1_2/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GATGGCAAGATTA--
-TTGCCCGGATTAGG
 A C T G C G T A A C G T A C T G A T C G A G T C C G T A C G T A A C T G C G T A C G A T A C G T C G T A A C G T A C G T
A C G T C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GATGGCAAGATTA
-TTGCCAAG----
 A C T G C G T A A C G T A C T G A T C G A G T C C G T A C G T A A C T G C G T A C G A T A C G T C G T A
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:8
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GATGGCAAGATTA-
------RGGATTAR
 A C T G C G T A A C G T A C T G A T C G A G T C C G T A C G T A A C T G C G T A C G A T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GATGGCAAGATTA
-AAGGCAAGTGT-
 A C T G C G T A A C G T A C T G A T C G A G T C C G T A C G T A A C T G C G T A C G A T A C G T C G T A
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:10
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GATGGCAAGATTA-
------NGGATTAA
 A C T G C G T A A C G T A C T G A T C G A G T C C G T A C G T A A C T G C G T A C G A T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A