Information for 9-ACACAGTTGACAWTCA (Motif 14)

C G T A A G T C G C T A A T G C G C T A C A T G C A G T C G A T T A C G C G T A G T A C C G T A C G T A C G A T T G A C G T C A
Reverse Opposite:
C A G T A C T G C G T A G C A T G A C T C A T G G A C T A T G C G C T A G T C A G T A C C G A T A T C G C G A T T C A G C G A T
p-value:1e-9
log p-value:-2.174e+01
Information Content per bp:1.642
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.93%
Number of Background Sequences with motif209.4
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets41.1 +/- 25.6bp
Average Position of motif in Background47.8 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0171.1_Nkx2-1/Jaspar

Match Rank:1
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ACACAGTTGACAWTCA
TAAGCCACTTGAAATT--
 A C G T A C G T C G T A A G T C G C T A A T G C G C T A C A T G C A G T C G A T T A C G C G T A G T A C C G T A C G T A C G A T T G A C G T C A
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T A C G T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ACACAGTTGACAWTCA
TAAGCCACTTGAAATT--
 A C G T A C G T C G T A A G T C G C T A A T G C G C T A C A T G C A G T C G A T T A C G C G T A G T A C C G T A C G T A C G A T T G A C G T C A
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:3
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---ACACAGTTGACAWTCA
CTCACACAATGGCGC----
 A C G T A C G T A C G T C G T A A G T C G C T A A T G C G C T A C A T G C A G T C G A T T A C G C G T A G T A C C G T A C G T A C G A T T G A C G T C A
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C A C G T A C G T A C G T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--ACACAGTTGACAWTCA
TAAGCCACTTAACATT--
 A C G T A C G T C G T A A G T C G C T A A T G C G C T A C A T G C A G T C G A T T A C G C G T A G T A C C G T A C G T A C G A T T G A C G T C A
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:5
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--ACACAGTTGACAWTCA
ATAAACAATTAAACA---
 A C G T A C G T C G T A A G T C G C T A A T G C G C T A C A T G C A G T C G A T T A C G C G T A G T A C C G T A C G T A C G A T T G A C G T C A
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.51
Offset:9
Orientation:forward strand
Alignment:ACACAGTTGACAWTCA-
---------CCAATCAA
 C G T A A G T C G C T A A T G C G C T A C A T G C A G T C G A T T A C G C G T A G T A C C G T A C G T A C G A T T G A C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:ACACAGTTGACAWTCA-
--------GACAATGNN
 C G T A A G T C G C T A A T G C G C T A C A T G C A G T C G A T T A C G C G T A G T A C C G T A C G T A C G A T T G A C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

PB0109.1_Bbx_2/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-ACACAGTTGACAWTCA
NNNNCTGTTAACNNTNN
 A C G T C G T A A G T C G C T A A T G C G C T A C A T G C A G T C G A T T A C G C G T A G T A C C G T A C G T A C G A T T G A C G T C A
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

SRY/MA0084.1/Jaspar

Match Rank:9
Score:0.50
Offset:5
Orientation:forward strand
Alignment:ACACAGTTGACAWTCA
-----GTAAACAAT--
 C G T A A G T C G C T A A T G C G C T A C A T G C A G T C G A T T A C G C G T A G T A C C G T A C G T A C G A T T G A C G T C A
A C G T A C G T A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:ACACAGTTGACAWTCA------
-----GACCACATTCATACAAT
 C G T A A G T C G C T A A T G C G C T A C A T G C A G T C G A T T A C G C G T A G T A C C G T A C G T A C G A T T G A C G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T