Information for 3-TTTGGTTGRC (Motif 12)

A C G T A C G T A C G T A C T G A C T G A C G T A C G T A T C G C T A G A T G C
Reverse Opposite:
A T C G G A T C A T G C C G T A C G T A A G T C A G T C G T C A C G T A C G T A
p-value:1e-9
log p-value:-2.236e+01
Information Content per bp:1.860
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.28%
Number of Background Sequences with motif108.4
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets39.8 +/- 18.7bp
Average Position of motif in Background46.8 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTTGGTTGRC-----
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A T C G C T A G A T G C A C G T A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTGGTTGRC
NNTGTGGTTT--
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A T C G C T A G A T G C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTTGGTTGRC
CTGTGGTTTN-
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A T C G C T A G A T G C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTTGGTTGRC
NNHTGTGGTTWN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A T C G C T A G A T G C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TTTGGTTGRC
GCTGTGGTTT--
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A T C G C T A G A T G C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTTGGTTGRC
-TTGATTGN-
 A C G T A C G T A C G T A C T G A C T G A C G T A C G T A T C G C T A G A T G C
A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTTGGTTGRC
GTCTGTGGTTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A T C G C T A G A T G C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTTGGTTGRC-----
NTTTTAGTTAACNNAGN
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A T C G C T A G A T G C A C G T A C G T A C G T A C G T A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTTGGTTGRC
TGTCGGTT---
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A T C G C T A G A T G C
C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T A C G T A C G T A C G T

ZBTB7B/MA0694.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTTGGTTGRC--
TTCGGTGGTCGC
 A C G T A C G T A C G T A C T G A C T G A C G T A C G T A T C G C T A G A T G C A C G T A C G T
C A G T C G A T A G T C C T A G C A T G C A G T A T C G A C T G C A G T G A T C A T C G G A T C