Information for 1-GANTTYTMCAGVA (Motif 6)

A C T G T C G A G C A T A C G T C A G T A G T C C G A T T G A C G T A C C G T A A C T G T G C A C G T A
Reverse Opposite:
C G A T A C G T G T A C C G A T C A T G A C T G C G T A C T A G G C T A T G C A C G T A A G C T T G A C
p-value:1e-13
log p-value:-3.184e+01
Information Content per bp:1.629
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif8.18%
Number of Background Sequences with motif1179.6
Percentage of Background Sequences with motif2.40%
Average Position of motif in Targets51.0 +/- 25.6bp
Average Position of motif in Background50.0 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GANTTYTMCAGVA--
---TTCTNNAGAANT
 A C T G T C G A G C A T A C G T C A G T A G T C C G A T T G A C G T A C C G T A A C T G T G C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A C T A G C T C T G A C T G A C T A G C G T A C G T A T C G A G A C T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:2
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GANTTYTMCAGVA
---TTCCKNAGAA
 A C T G T C G A G C A T A C G T C A G T A G T C C G A T T G A C G T A C C G T A A C T G T G C A C G T A
A C G T A C G T A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A

Stat6/MA0520.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GANTTYTMCAGVA--
CATTTCCTGAGAAAT
 A C T G T C G A G C A T A C G T C A G T A G T C C G A T T G A C G T A C C G T A A C T G T G C A C G T A A C G T A C G T
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T

NFATC2/MA0152.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GANTTYTMCAGVA
---TTTTCCA---
 A C T G T C G A G C A T A C G T C A G T A G T C C G A T T G A C G T A C C G T A A C T G T G C A C G T A
A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------GANTTYTMCAGVA-
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T C G A G C A T A C G T C A G T A G T C C G A T T G A C G T A C C G T A A C T G T G C A C G T A A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------GANTTYTMCAGVA-
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T C G A G C A T A C G T C A G T A G T C C G A T T G A C G T A C C G T A A C T G T G C A C G T A A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GANTTYTMCAGVA
-NTTTTACGAGN-
 A C T G T C G A G C A T A C G T C A G T A G T C C G A T T G A C G T A C C G T A A C T G T G C A C G T A
A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GANTTYTMCAGVA--
ANATTTTACGAGNNNN
 A C G T A C T G T C G A G C A T A C G T C A G T A G T C C G A T T G A C G T A C C G T A A C T G T G C A C G T A A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

STAT3/MA0144.2/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GANTTYTMCAGVA-
---TTTCCCAGAAN
 A C T G T C G A G C A T A C G T C A G T A G T C C G A T T G A C G T A C C G T A A C T G T G C A C G T A A C G T
A C G T A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

PH0068.1_Hoxc13/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GANTTYTMCAGVA--
NAATTTTACGAGNTNN
 A C G T A C T G T C G A G C A T A C G T C A G T A G T C C G A T T G A C G T A C C G T A A C T G T G C A C G T A A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T