Information for 6-TTCAAAGATC (Motif 27)

A C G T C G A T A G T C C G T A C G T A G T C A A C T G C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C T G C G T A C G T A
p-value:1e-6
log p-value:-1.502e+01
Information Content per bp:1.939
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif19.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets54.7 +/- 20.4bp
Average Position of motif in Background42.1 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TTCAAAGATC
ACATCAAAGG--
 A C G T A C G T A C G T C G A T A G T C C G T A C G T A G T C A A C T G C G T A A C G T A G T C
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TTCAAAGATC
CGGTTTCAAA----
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C C G T A C G T A G T C A A C T G C G T A A C G T A G T C
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TTCAAAGATC-
GGGGTCAAAGGTCA
 A C G T A C G T A C G T A C G T C G A T A G T C C G T A C G T A G T C A A C T G C G T A A C G T A G T C A C G T
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TTCAAAGATC-
AGAGTCCAAAGTCCA
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C C G T A C G T A G T C A A C T G C G T A A C G T A G T C A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

Rxra/MA0512.2/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TTCAAAGATC-
GGGGTCAAAGGTCA
 A C G T A C G T A C G T A C G T C G A T A G T C C G T A C G T A G T C A A C T G C G T A A C G T A G T C A C G T
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

RXRB/MA0855.1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TTCAAAGATC-
GGGGTCAAAGGTCA
 A C G T A C G T A C G T A C G T C G A T A G T C C G T A C G T A G T C A A C T G C G T A A C G T A G T C A C G T
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:7
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TTCAAAGATC-
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G T C C G T A C G T A G T C A A C T G C G T A A C G T A G T C A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

Nr2f6/MA0677.1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TTCAAAGATC-
GAGGTCAAAGGTCA
 A C G T A C G T A C G T A C G T C G A T A G T C C G T A C G T A G T C A A C T G C G T A A C G T A G T C A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTCAAAGATC-----
TCTCAAAGGTCACCTG
 A C G T A C G T C G A T A G T C C G T A C G T A G T C A A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTCAAAGATC
NATTCAAAT---
 A C G T A C G T A C G T C G A T A G T C C G T A C G T A G T C A A C T G C G T A A C G T A G T C
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T