Information for 2-AAGGGAGAARCATGCT (Motif 2)

T G C A C G T A A C T G C T A G T A C G C T G A A T C G T G C A C T G A C T A G G T A C G T C A A C G T A C T G G A T C G A C T
Reverse Opposite:
C T G A C T A G A G T C G T C A C A G T A C T G G A T C A G C T A C G T A T G C G A C T A G T C A G T C G T A C G C A T A C G T
p-value:1e-16
log p-value:-3.817e+01
Information Content per bp:1.675
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.42%
Number of Background Sequences with motif50.0
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets54.7 +/- 25.7bp
Average Position of motif in Background49.9 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AAGGGAGAARCATGCT
--GGGAGGACNG----
 T G C A C G T A A C T G C T A G T A C G C T G A A T C G T G C A C T G A C T A G G T A C G T C A A C G T A C T G G A T C G A C T
A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AAGGGAGAARCATGCT
NNNNGGGGGAAGANGG--
 A C G T A C G T T G C A C G T A A C T G C T A G T A C G C T G A A T C G T G C A C T G A C T A G G T A C G T C A A C G T A C T G G A T C G A C T
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AAGGGAGAARCATGCT
-AAGGKGRCGCAGGCA
 T G C A C G T A A C T G C T A G T A C G C T G A A T C G T G C A C T G A C T A G G T A C G T C A A C G T A C T G G A T C G A C T
A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

KLF5/MA0599.1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AAGGGAGAARCATGCT
-GGGGNGGGGC-----
 T G C A C G T A A C T G C T A G T A C G C T G A A T C G T G C A C T G A C T A G G T A C G T C A A C G T A C T G G A T C G A C T
A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T A C G T A C G T A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AAGGGAGAARCATGCT
ARGAGGMCAAAATGW-
 T G C A C G T A A C T G C T A G T A C G C T G A A T C G T G C A C T G A C T A G G T A C G T C A A C G T A C T G G A T C G A C T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AAGGGAGAARCATGCT
-DGGGYGKGGC-----
 T G C A C G T A A C T G C T A G T A C G C T G A A T C G T G C A C T G A C T A G G T A C G T C A A C G T A C T G G A T C G A C T
A C G T C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:7
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AAGGGAGAARCATGCT
ADGGYAGYAGCATCT-
 T G C A C G T A A C T G C T A G T A C G C T G A A T C G T G C A C T G A C T A G G T A C G T C A A C G T A C T G G A T C G A C T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AAGGGAGAARCATGCT
-TGGGTGGGGC-----
 T G C A C G T A A C T G C T A G T A C G C T G A A T C G T G C A C T G A C T A G G T A C G T C A A C G T A C T G G A T C G A C T
A C G T C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C A C G T A C G T A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--AAGGGAGAARCATGCT
NNVDGGGYGGGGCYN---
 A C G T A C G T T G C A C G T A A C T G C T A G T A C G C T G A A T C G T G C A C T G A C T A G G T A C G T C A A C G T A C T G G A T C G A C T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:AAGGGAGAARCATGCT
--CGGAGC--------
 T G C A C G T A A C T G C T A G T A C G C T G A A T C G T G C A C T G A C T A G G T A C G T C A A C G T A C T G G A T C G A C T
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T