Information for 4-TCATGAATCA (Motif 16)

A G C T A G T C G T C A A C G T C A T G C G T A C T G A A C G T G A T C C G T A
Reverse Opposite:
C G A T C T A G G T C A G A C T A C G T G T A C C G T A C A G T T C A G T C G A
p-value:1e-9
log p-value:-2.095e+01
Information Content per bp:1.800
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.73%
Number of Background Sequences with motif205.6
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets57.7 +/- 28.2bp
Average Position of motif in Background52.0 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:1
Score:0.85
Offset:0
Orientation:forward strand
Alignment:TCATGAATCA
TCATCAATCA
 A G C T A G T C G T C A A C G T C A T G C G T A C T G A A C G T G A T C C G T A
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A

Hoxa9/MA0594.1/Jaspar

Match Rank:2
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-TCATGAATCA
GCCATAAATCA
 A C G T A G C T A G T C G T C A A C G T C A T G C G T A C T G A A C G T G A T C C G T A
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A

FOS/MA0476.1/Jaspar

Match Rank:3
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:TCATGAATCA--
-NATGAGTCANN
 A G C T A G T C G T C A A C G T C A T G C G T A C T G A A C G T G A T C C G T A A C G T A C G T
A C G T T C G A T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A T G C G T C A

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.81
Offset:-4
Orientation:reverse strand
Alignment:----TCATGAATCA
NNTNTCATGAATGT
 A C G T A C G T A C G T A C G T A G C T A G T C G T C A A C G T C A T G C G T A C T G A A C G T G A T C C G T A
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

JUND/MA0491.1/Jaspar

Match Rank:5
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:TCATGAATCA--
-NATGAGTCACN
 A G C T A G T C G T C A A C G T C A T G C G T A C T G A A C G T G A T C C G T A A C G T A C G T
A C G T A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:6
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--TCATGAATCA
GGCCATAAATCA
 A C G T A C G T A G C T A G T C G T C A A C G T C A T G C G T A C T G A A C G T G A T C C G T A
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:7
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:TCATGAATCA---
-DATGASTCATNN
 A G C T A G T C G T C A A C G T C A T G C G T A C T G A A C G T G A T C C G T A A C G T A C G T A C G T
A C G T C A T G T C G A C G A T C A T G G C T A T A G C C G A T G T A C G C T A A G C T G A T C T G A C

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:8
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--TCATGAATCA
RGCCATYAATCA
 A C G T A C G T A G C T A G T C G T C A A C G T C A T G C G T A C T G A A C G T G A T C C G T A
C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:9
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:TCATGAATCA--
--ATGASTCATH
 A G C T A G T C G T C A A C G T C A T G C G T A C T G A A C G T G A T C C G T A A C G T A C G T
A C G T A C G T T G C A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A C G T G T C A

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:TCATGAATCA-
-GATGAGTCAT
 A G C T A G T C G T C A A C G T C A T G C G T A C T G A A C G T G A T C C G T A A C G T
A C G T T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T