Information for 7-AGAGTTGGCCAGGAKG (Motif 15)

C G T A C T A G C G T A A T C G A G C T C G A T C T A G C T A G A G T C T G A C G T C A A C T G T C A G T C G A C A T G C A T G
Reverse Opposite:
G A T C G T A C A C G T A G T C T G A C A C G T A C T G C T A G A G T C G A T C C G T A T C G A A T G C A C G T A G T C C G A T
p-value:1e-9
log p-value:-2.170e+01
Information Content per bp:1.709
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif29.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets43.9 +/- 24.7bp
Average Position of motif in Background46.2 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGAGTTGGCCAGGAKG
---NTTGGCANN----
 C G T A C T A G C G T A A T C G A G C T C G A T C T A G C T A G A G T C T G A C G T C A A C T G T C A G T C G A C A T G C A T G
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AGAGTTGGCCAGGAKG
----TTGGCA------
 C G T A C T A G C G T A A T C G A G C T C G A T C T A G C T A G A G T C T G A C G T C A A C T G T C A G T C G A C A T G C A T G
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGAGTTGGCCAGGAKG
AACAGATGGC-------
 A C G T C G T A C T A G C G T A A T C G A G C T C G A T C T A G C T A G A G T C T G A C G T C A A C T G T C A G T C G A C A T G C A T G
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGAGTTGGCCAGGAKG
--GGTTGGCAT-----
 C G T A C T A G C G T A A T C G A G C T C G A T C T A G C T A G A G T C T G A C G T C A A C T G T C A G T C G A C A T G C A T G
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGAGTTGGCCAGGAKG
--NNTTGGCANN----
 C G T A C T A G C G T A A T C G A G C T C G A T C T A G C T A G A G T C T G A C G T C A A C T G T C A G T C G A C A T G C A T G
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AGAGTTGGCCAGGAKG
---CTTGGCAA-----
 C G T A C T A G C G T A A T C G A G C T C G A T C T A G C T A G A G T C T G A C G T C A A C T G T C A G T C G A C A T G C A T G
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AGAGTTGGCCAGGAKG
NAACAGCTGG--------
 A C G T A C G T C G T A C T A G C G T A A T C G A G C T C G A T C T A G C T A G A G T C T G A C G T C A A C T G T C A G T C G A C A T G C A T G
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:8
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----AGAGTTGGCCAGGAKG
GAAGAACAGGTGTCCG-----
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G C G T A A T C G A G C T C G A T C T A G C T A G A G T C T G A C G T C A A C T G T C A G T C G A C A T G C A T G
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G A C G T A C G T A C G T A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:9
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---AGAGTTGGCCAGGAKG
TGCGGAGTGGGACTGG---
 A C G T A C G T A C G T C G T A C T A G C G T A A T C G A G C T C G A T C T A G C T A G A G T C T G A C G T C A A C T G T C A G T C G A C A T G C A T G
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:10
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----AGAGTTGGCCAGGAKG
CACGGCAGTTGGTNN-----
 A C G T A C G T A C G T A C G T C G T A C T A G C G T A A T C G A G C T C G A T C T A G C T A G A G T C T G A C G T C A A C T G T C A G T C G A C A T G C A T G
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G A C G T A C G T A C G T A C G T A C G T