Information for 11-AMCAGGKCYCAKYRAT (Motif 20)

C G T A G T A C A G T C C G T A A C T G A C T G A C T G A G T C A G C T G T A C C G T A A C T G A G C T C T A G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G C T C T G A G T A C A C G T A C T G C T G A A C T G G T A C A G T C A G T C A C G T A C T G A C T G C G A T
p-value:1e-7
log p-value:-1.652e+01
Information Content per bp:1.852
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.8 +/- 29.7bp
Average Position of motif in Background85.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AMCAGGKCYCAKYRAT
CGAACAGTGCTCACTAT-
 A C G T A C G T C G T A G T A C A G T C C G T A A C T G A C T G A C T G A G T C A G C T G T A C C G T A A C T G A G C T C T A G C G T A A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:2
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AMCAGGKCYCAKYRAT
NNAGGGACAAGGGCNC------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T A C A G T C C G T A A C T G A C T G A C T G A G T C A G C T G T A C C G T A A C T G A G C T C T A G C G T A A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PH0150.1_Pou4f3/Jaspar

Match Rank:3
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AMCAGGKCYCAKYRAT----
----GACNTCATTAATAANN
 C G T A G T A C A G T C C G T A A C T G A C T G A C T G A G T C A G C T G T A C C G T A A C T G A G C T C T A G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

PH0164.1_Six4/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AMCAGGKCYCAKYRAT
TNNNNGGTGTCATNTNT
 A C G T C G T A G T A C A G T C C G T A A C T G A C T G A C T G A G T C A G C T G T A C C G T A A C T G A G C T C T A G C G T A A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:AMCAGGKCYCAKYRAT
-CNAGGCCT-------
 C G T A G T A C A G T C C G T A A C T G A C T G A C T G A G T C A G C T G T A C C G T A A C T G A G C T C T A G C G T A A C G T
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:6
Score:0.49
Offset:0
Orientation:forward strand
Alignment:AMCAGGKCYCAKYRAT
AACAGGTGT-------
 C G T A G T A C A G T C C G T A A C T G A C T G A C T G A G T C A G C T G T A C C G T A A C T G A G C T C T A G C G T A A C G T
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:7
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-AMCAGGKCYCAKYRAT
TGACAGGTGTCA-----
 A C G T C G T A G T A C A G T C C G T A A C T G A C T G A C T G A G T C A G C T G T A C C G T A A C T G A G C T C T A G C G T A A C G T
C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A A C G T A C G T A C G T A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:8
Score:0.49
Offset:8
Orientation:forward strand
Alignment:AMCAGGKCYCAKYRAT--
--------TCATCAATCA
 C G T A G T A C A G T C C G T A A C T G A C T G A C T G A G T C A G C T G T A C C G T A A C T G A G C T C T A G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:AMCAGGKCYCAKYRAT
-CTAGGCCT-------
 C G T A G T A C A G T C C G T A A C T G A C T G A C T G A G T C A G C T G T A C C G T A A C T G A G C T C T A G C G T A A C G T
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:10
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----AMCAGGKCYCAKYRAT
ATGCAACAGGTGG-------
 A C G T A C G T A C G T A C G T C G T A G T A C A G T C C G T A A C T G A C T G A C T G A G T C A G C T G T A C C G T A A C T G A G C T C T A G C G T A A C G T
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T