Information for 5-TTGGAAGRTSACATTT (Motif 6)

C A G T C G A T C A T G T A C G T G C A C G T A T C A G T C A G C A G T T A C G C T G A A T G C G T C A C A G T C G A T G C A T
Reverse Opposite:
C G T A C G T A G T C A C A G T A T C G A G C T A T G C G T C A A G T C A G T C A C G T A C G T A G T C G T A C C G T A G T C A
p-value:1e-10
log p-value:-2.397e+01
Information Content per bp:1.662
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif2.38%
Number of Background Sequences with motif39.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets61.2 +/- 19.7bp
Average Position of motif in Background49.6 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myb/MA0100.2/Jaspar

Match Rank:1
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:TTGGAAGRTSACATTT--
--------TGGCAGTTGN
 C A G T C G A T C A T G T A C G T G C A C G T A T C A G T C A G C A G T T A C G C T G A A T G C G T C A C A G T C G A T G C A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TTGGAAGRTSACATTT
----AAGGTCAC----
 C A G T C G A T C A T G T A C G T G C A C G T A T C A G T C A G C A G T T A C G C T G A A T G C G T C A C A G T C G A T G C A T
A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TTGGAAGRTSACATTT
---GAAAGTGAAAGT-
 C A G T C G A T C A T G T A C G T G C A C G T A T C A G T C A G C A G T T A C G C T G A A T G C G T C A C A G T C G A T G C A T
A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TTGGAAGRTSACATTT-
--AGAAAGTGAAAGTGA
 C A G T C G A T C A T G T A C G T G C A C G T A T C A G T C A G C A G T T A C G C T G A A T G C G T C A C A G T C G A T G C A T A C G T
A C G T A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:5
Score:0.53
Offset:8
Orientation:forward strand
Alignment:TTGGAAGRTSACATTT--
--------TGGCAGTTGG
 C A G T C G A T C A T G T A C G T G C A C G T A T C A G T C A G C A G T T A C G C T G A A T G C G T C A C A G T C G A T G C A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TTGGAAGRTSACATTT
-TGGAAAA--------
 C A G T C G A T C A T G T A C G T G C A C G T A T C A G T C A G C A G T T A C G C T G A A T G C G T C A C A G T C G A T G C A T
A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TTGGAAGRTSACATTT
--TCAAGGTCAN----
 C A G T C G A T C A T G T A C G T G C A C G T A T C A G T C A G C A G T T A C G C T G A A T G C G T C A C A G T C G A T G C A T
A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TTGGAAGRTSACATTT
---GAAACTGAAACT-
 C A G T C G A T C A T G T A C G T G C A C G T A T C A G T C A G C A G T T A C G C T G A A T G C G T C A C A G T C G A T G C A T
A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TTGGAAGRTSACATTT
-TGGAACAGMA-----
 C A G T C G A T C A T G T A C G T G C A C G T A T C A G T C A G C A G T T A C G C T G A A T G C G T C A C A G T C G A T G C A T
A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:TTGGAAGRTSACATTT-----
-----NNNTGGCAGTTGGTNN
 C A G T C G A T C A T G T A C G T G C A C G T A T C A G T C A G C A G T T A C G C T G A A T G C G T C A C A G T C G A T G C A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G