Information for 1-GTCCATCCTC (Motif 3)

A C T G A C G T A G T C G T A C G T C A A C G T A T G C A G T C A C G T A G T C
Reverse Opposite:
C T A G C G T A A C T G A T C G G T C A C A G T A C T G C T A G C G T A T G A C
p-value:1e-11
log p-value:-2.609e+01
Information Content per bp:1.854
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif4.76%
Number of Background Sequences with motif261.0
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets42.9 +/- 21.0bp
Average Position of motif in Background48.5 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTCCATCCTC-
KGCCCTTCCCCA
 A C G T A C T G A C G T A G T C G T A C G T C A A C G T A T G C A G T C A C G T A G T C A C G T
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTCCATCCTC-
NNGCACCTTTCTCC
 A C G T A C G T A C G T A C T G A C G T A G T C G T A C G T C A A C G T A T G C A G T C A C G T A G T C A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTCCATCCTC--
--CNGTCCTCCC
 A C T G A C G T A G T C G T A C G T C A A C G T A T G C A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTCCATCCTC--
NNAYTTCCTGHN
 A C T G A C G T A G T C G T A C G T C A A C G T A T G C A G T C A C G T A G T C A C G T A C G T
A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GTCCATCCTC-----
GCCCCGCCCCCTCCC
 A C T G A C G T A G T C G T A C G T C A A C G T A T G C A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

PB0181.1_Spdef_2/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTCCATCCTC----
GATAACATCCTAGTAG
 A C G T A C G T A C T G A C G T A G T C G T A C G T C A A C G T A T G C A G T C A C G T A G T C A C G T A C G T A C G T A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GTCCATCCTC
GYCATCMATCAT-
 A C G T A C G T A C G T A C T G A C G T A G T C G T A C G T C A A C G T A T G C A G T C A C G T A G T C
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T

PH0123.1_Obox3/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GTCCATCCTC----
ATAGTTAATCCCCCNNA
 A C G T A C G T A C G T A C T G A C G T A G T C G T A C G T C A A C G T A T G C A G T C A C G T A G T C A C G T A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

SP1/MA0079.3/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GTCCATCCTC-
GCCCCGCCCCC
 A C T G A C G T A G T C G T A C G T C A A C G T A T G C A G T C A C G T A G T C A C G T
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

PH0121.1_Obox1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GTCCATCCTC----
NTAGTTAATCCCCTTAN
 A C G T A C G T A C G T A C T G A C G T A G T C G T A C G T C A A C G T A T G C A G T C A C G T A G T C A C G T A C G T A C G T A C G T
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A