Information for 12-AGAGGAACAGTGAGAC (Motif 26)

C G T A A T C G C G T A A C T G A C T G C G T A C G T A A G T C C G T A A T C G A C G T A C T G C G T A A C T G C G T A A G T C
Reverse Opposite:
C T A G A C G T A G T C C G A T A G T C C G T A A T G C A C G T C T A G A C G T A C G T A G T C A G T C G C A T A T G C A C G T
p-value:1e-4
log p-value:-1.043e+01
Information Content per bp:1.923
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.0 +/- 6.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGAGGAACAGTGAGAC
AGAGGAA---------
 C G T A A T C G C G T A A C T G A C T G C G T A C G T A A G T C C G T A A T C G A C G T A C T G C G T A A C T G C G T A A G T C
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGAGGAACAGTGAGAC
--TGGAACAGMA----
 C G T A A T C G C G T A A C T G A C T G C G T A C G T A A G T C C G T A A T C G A C G T A C T G C G T A A C T G C G T A A G T C
A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGAGGAACAGTGAGAC
AGAGGAAGTG------
 C G T A A T C G C G T A A C T G A C T G C G T A C G T A A G T C C G T A A T C G A C G T A C T G C G T A A C T G C G T A A G T C
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGAGGAACAGTGAGAC
CCAGGAACAG------
 C G T A A T C G C G T A A C T G A C T G C G T A C G T A A G T C C G T A A T C G A C G T A C T G C G T A A C T G C G T A A G T C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGAGGAACAGTGAGAC
AAAGRGGAAGTG------
 A C G T A C G T C G T A A T C G C G T A A C T G A C T G C G T A C G T A A G T C C G T A A T C G A C G T A C T G C G T A A C T G C G T A A G T C
C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGAGGAACAGTGAGAC-
-AATGAACAATGGAATT
 C G T A A T C G C G T A A C T G A C T G C G T A C G T A A G T C C G T A A T C G A C G T A C T G C G T A A C T G C G T A A G T C A C G T
A C G T C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGAGGAACAGTGAGAC--
WNAGTCADAVTGAAACTN
 C G T A A T C G C G T A A C T G A C T G C G T A C G T A A G T C C G T A A T C G A C G T A C T G C G T A A C T G C G T A A G T C A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AGAGGAACAGTGAGAC
-BAGTCATANTGAAAG
 C G T A A T C G C G T A A C T G A C T G C G T A C G T A A G T C C G T A A T C G A C G T A C T G C G T A A C T G C G T A A G T C
A C G T A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:AGAGGAACAGTGAGAC
---GGAACAAAGR---
 C G T A A T C G C G T A A C T G A C T G C G T A C G T A A G T C C G T A A T C G A C G T A C T G C G T A A C T G C G T A A G T C
A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:AGAGGAACAGTGAGAC
----GAACAATGGN--
 C G T A A T C G C G T A A C T G A C T G C G T A C G T A A G T C C G T A A T C G A C G T A C T G C G T A A C T G C G T A A G T C
A C G T A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T