Information for 11-CACGGCBDTTCTGGCC (Motif 23)

A G T C C G T A G T A C A C T G A C T G G T A C A C G T C A T G A G C T A C G T A T G C C G A T A C T G A T C G A G T C A G T C
Reverse Opposite:
C T A G A C T G T A G C A G T C C G T A T A C G C G T A C T G A G A T C T C G A A C T G A G T C A G T C A C T G A C G T A C T G
p-value:1e-7
log p-value:-1.640e+01
Information Content per bp:1.807
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets76.3 +/- 14.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR2/MA0258.2/Jaspar

Match Rank:1
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CACGGCBDTTCTGGCC-
--AGGNCANNGTGACCT
 A G T C C G T A G T A C A C T G A C T G G T A C A C G T C A T G A G C T A C G T A T G C C G A T A C T G A T C G A G T C A G T C A C G T
A C G T A C G T C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CACGGCBDTTCTGGCC
-NAGGTCACNNTGACC
 A G T C C G T A G T A C A C T G A C T G G T A C A C G T C A T G A G C T A C G T A T G C C G A T A C T G A T C G A G T C A G T C
A C G T T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

ESR1/MA0112.3/Jaspar

Match Rank:3
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CACGGCBDTTCTGGCC--
-CAGGTCACCGTGACCTT
 A G T C C G T A G T A C A C T G A C T G G T A C A C G T C A T G A G C T A C G T A T G C C G A T A C T G A T C G A G T C A G T C A C G T A C G T
A C G T T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CACGGCBDTTCTGGCC----
-----WCATTTTGKCCTCYT
 A G T C C G T A G T A C A C T G A C T G G T A C A C G T C A T G A G C T A C G T A T G C C G A T A C T G A T C G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CACGGCBDTTCTGGCC
NTCAAGGTCA--------
 A C G T A C G T A G T C C G T A G T A C A C T G A C T G G T A C A C G T C A T G A G C T A C G T A T G C C G A T A C T G A T C G A G T C A G T C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.49
Offset:6
Orientation:forward strand
Alignment:CACGGCBDTTCTGGCC------
------GGGTGTGCCCAAAAGG
 A G T C C G T A G T A C A C T G A C T G G T A C A C G T C A T G A G C T A C G T A T G C C G A T A C T G A T C G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--CACGGCBDTTCTGGCC
BTCAAGGTCA--------
 A C G T A C G T A G T C C G T A G T A C A C T G A C T G G T A C A C G T C A T G A G C T A C G T A T G C C G A T A C T G A T C G A G T C A G T C
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:8
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--CACGGCBDTTCTGGCC
AACAATGNTATTGTT---
 A C G T A C G T A G T C C G T A G T A C A C T G A C T G G T A C A C G T C A T G A G C T A C G T A T G C C G A T A C T G A T C G A G T C A G T C
T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.47
Offset:0
Orientation:forward strand
Alignment:CACGGCBDTTCTGGCC
CAAGGHCANV------
 A G T C C G T A G T A C A C T G A C T G G T A C A C G T C A T G A G C T A C G T A T G C C G A T A C T G A T C G A G T C A G T C
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.47
Offset:11
Orientation:reverse strand
Alignment:CACGGCBDTTCTGGCC---
-----------TGACCTYA
 A G T C C G T A G T A C A C T G A C T G G T A C A C G T C A T G A G C T A C G T A T G C C G A T A C T G A T C G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A