Information for 5-TGCCCATTTGATA (Motif 9)

A C G T A T C G G T A C G T A C A G T C C G T A A C G T C A G T A C G T C T A G C G T A A G C T T G C A
Reverse Opposite:
A C G T C T G A A C G T A G T C C G T A G C T A C G T A C G A T C T A G A C T G C A T G T A G C C G T A
p-value:1e-11
log p-value:-2.575e+01
Information Content per bp:1.757
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif2.20%
Number of Background Sequences with motif49.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets51.9 +/- 32.1bp
Average Position of motif in Background45.4 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rarg/MA0859.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGCCCATTTGATA--
TTGACCTTTTGACCTT
 A C G T A C G T A T C G G T A C G T A C A G T C C G T A A C G T C A G T A C G T C T A G C G T A A G C T T G C A A C G T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

Rarb/MA0857.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGCCCATTTGATA---
TGACCTTTTGACCTTT
 A C G T A T C G G T A C G T A C A G T C C G T A A C G T C A G T A C G T C T A G C G T A A G C T T G C A A C G T A C G T A C G T
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

Arid3a/MA0151.1/Jaspar

Match Rank:3
Score:0.67
Offset:6
Orientation:reverse strand
Alignment:TGCCCATTTGATA
------TTTAAT-
 A C G T A T C G G T A C G T A C A G T C C G T A A C G T C A G T A C G T C T A G C G T A A G C T T G C A
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T

RARA/MA0729.1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGCCCATTTGATA--
CATTGACCTTTTGACCTC
 A C G T A C G T A C G T A C G T A T C G G T A C G T A C A G T C C G T A A C G T C A G T A C G T C T A G C G T A A G C T T G C A A C G T A C G T
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGCCCATTTGATA--
TGACCTTTTGACCTC
 A C G T A T C G G T A C G T A C A G T C C G T A A C G T C A G T A C G T C T A G C G T A A G C T T G C A A C G T A C G T
A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

PB0040.1_Lef1_1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGCCCATTTGATA----
AATCCCTTTGATCTATC
 A C G T A T C G G T A C G T A C A G T C C G T A A C G T C A G T A C G T C T A G C G T A A G C T T G C A A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGCCCATTTGATA----
ATTTCCTTTGATCTATA
 A C G T A T C G G T A C G T A C A G T C C G T A A C G T C A G T A C G T C T A G C G T A A G C T T G C A A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGCCCATTTGATA----
NNTTCCTTTGATCTANA
 A C G T A T C G G T A C G T A C A G T C C G T A A C G T C A G T A C G T C T A G C G T A A G C T T G C A A C G T A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

PB0105.1_Arid3a_2/Jaspar

Match Rank:9
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TGCCCATTTGATA-----
---NNATNTGATANNNNN
 A C G T A T C G G T A C G T A C A G T C C G T A A C G T C A G T A C G T C T A G C G T A A G C T T G C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C T G A G C T A A G C T G C A T G A C T A T C G T C G A A G C T T C G A A G T C A T C G A C T G C A T G C A G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGCCCATTTGATA----
NNTTCCTTTGATCTNNA
 A C G T A T C G G T A C G T A C A G T C C G T A A C G T C A G T A C G T C T A G C G T A A G C T T G C A A C G T A C G T A C G T A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A