Information for 2-TCTTTCCTTAAAC (Motif 3)

A C G T A G T C G A C T G C A T A C G T G T A C G T A C G A C T G A C T G C T A G T C A C G T A A T G C
Reverse Opposite:
T A C G G A C T A C G T C G A T C T G A C T G A C A T G C A T G C G T A C G T A C G T A C T A G C G T A
p-value:1e-13
log p-value:-3.161e+01
Information Content per bp:1.710
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif3.21%
Number of Background Sequences with motif100.6
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets47.6 +/- 26.2bp
Average Position of motif in Background51.4 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCTTTCCTTAAAC
TGTTTACTTT---
 A C G T A G T C G A C T G C A T A C G T G T A C G T A C G A C T G A C T G C T A G T C A C G T A A T G C
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCTTTCCTTAAAC
TGTTTACTTT---
 A C G T A G T C G A C T G C A T A C G T G T A C G T A C G A C T G A C T G C T A G T C A C G T A A T G C
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TCTTTCCTTAAAC
TRTTTACTTW---
 A C G T A G T C G A C T G C A T A C G T G T A C G T A C G A C T G A C T G C T A G T C A C G T A A T G C
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T A C G T

HOXC10/MA0905.1/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TCTTTCCTTAAAC
---GTCGTAAAAT
 A C G T A G T C G A C T G C A T A C G T G T A C G T A C G A C T G A C T G C T A G T C A C G T A A T G C
A C G T A C G T A C G T T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

FOXA1/MA0148.3/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TCTTTCCTTAAAC
TCCATGTTTACTTTG--
 A C G T A C G T A C G T A C G T A C G T A G T C G A C T G C A T A C G T G T A C G T A C G A C T G A C T G C T A G T C A C G T A A T G C
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TCTTTCCTTAAAC
ATATTTACATA---
 A C G T A C G T A G T C G A C T G C A T A C G T G T A C G T A C G A C T G A C T G C T A G T C A C G T A A T G C
C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A A C G T A C G T A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TCTTTCCTTAAAC
---GTCGTAAAAA
 A C G T A G T C G A C T G C A T A C G T G T A C G T A C G A C T G A C T G C T A G T C A C G T A A T G C
A C G T A C G T A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A

FOXC2/MA0846.1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TCTTTCCTTAAAC
TTTGTTTACTTA---
 A C G T A C G T A C G T A G T C G A C T G C A T A C G T G T A C G T A C G A C T G A C T G C T A G T C A C G T A A T G C
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T A C G T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TCTTTCCTTAAAC
ATATTTACATA---
 A C G T A C G T A G T C G A C T G C A T A C G T G T A C G T A C G A C T G A C T G C T A G T C A C G T A A T G C
C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A A C G T A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TCTTTCCTTAAAC
NNNTTTGTTTACTTTTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T G C A T A C G T G T A C G T A C G A C T G A C T G C T A G T C A C G T A A T G C
T A C G G A C T A T G C C G A T C G A T C G A T C T A G C G A T C A G T C A G T C T G A A G T C G C A T G C A T C G A T C G A T C G A T A C G T