Information for 14-CTKGGTTTTTYAG (Motif 20)

G T A C C G A T A C G T C A T G A C T G A C G T C A G T C G A T C G A T G A C T A G C T C G T A T A C G
Reverse Opposite:
A T G C A C G T C T G A C T G A G C T A C G T A G T C A T C G A A G T C G T A C G T C A C G T A C A T G
p-value:1e-7
log p-value:-1.775e+01
Information Content per bp:1.628
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif4.81%
Number of Background Sequences with motif594.5
Percentage of Background Sequences with motif1.21%
Average Position of motif in Targets42.8 +/- 23.1bp
Average Position of motif in Background51.4 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0061.1_Sox11_1/Jaspar

Match Rank:1
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CTKGGTTTTTYAG
NNNTCCTTTGTTCTNNN-
 A C G T A C G T A C G T A C G T A C G T G T A C C G A T A C G T C A T G A C T G A C G T C A G T C G A T C G A T G A C T A G C T C G T A T A C G
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTKGGTTTTTYAG
CCTTTGTTTT----
 A C G T G T A C C G A T A C G T C A T G A C T G A C G T C A G T C G A T C G A T G A C T A G C T C G T A T A C G
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CTKGGTTTTTYAG
NNNNTTTGTTTACNNT
 A C G T A C G T A C G T G T A C C G A T A C G T C A T G A C T G A C G T C A G T C G A T C G A T G A C T A G C T C G T A T A C G
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

FOXP1/MA0481.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTKGGTTTTTYAG--
CTTTGTTTACTTTTN
 G T A C C G A T A C G T C A T G A C T G A C G T C A G T C G A T C G A T G A C T A G C T C G T A T A C G A C G T A C G T
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

Foxq1/MA0040.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTKGGTTTTTYAG
TATTGTTTATT--
 G T A C C G A T A C G T C A T G A C T G A C G T C A G T C G A T C G A T G A C T A G C T C G T A T A C G
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T

PH0044.1_Homez/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CTKGGTTTTTYAG
AAAACATCGTTTTTAAG
 A C G T A C G T A C G T A C G T G T A C C G A T A C G T C A T G A C T G A C G T C A G T C G A T C G A T G A C T A G C T C G T A T A C G
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----CTKGGTTTTTYAG
TNNTCCTTTGTTCTNNT-
 A C G T A C G T A C G T A C G T A C G T G T A C C G A T A C G T C A T G A C T G A C G T C A G T C G A T C G A T G A C T A G C T C G T A T A C G
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTKGGTTTTTYAG
CCATTGTTTT----
 A C G T G T A C C G A T A C G T C A T G A C T G A C G T C A G T C G A T C G A T G A C T A G C T C G T A T A C G
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T

POL007.1_BREd/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CTKGGTTTTTYAG
----GTTTGTT--
 G T A C C G A T A C G T C A T G A C T G A C G T C A G T C G A T C G A T G A C T A G C T C G T A T A C G
A C G T A C G T A C G T A C G T C T A G A C G T C A G T A C G T A C T G A C G T A C G T A C G T A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:10
Score:0.52
Offset:-8
Orientation:reverse strand
Alignment:--------CTKGGTTTTTYAG-
TNNANNTCTATTGTTNTNNANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G A T A C G T C A T G A C T G A C G T C A G T C G A T C G A T G A C T A G C T C G T A T A C G A C G T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T