Information for 2-ARGTAGYAAWYTCMYA (Motif 3)

C G T A C T G A A C T G A C G T C T G A C T A G A G T C C G T A C G T A C G A T A G C T A C G T A G T C G T A C A G C T C G T A
Reverse Opposite:
A C G T C T G A A C T G A C T G C G T A C T G A C G T A A C G T A C G T C T A G A G T C A G C T C G T A A G T C A G C T A C G T
p-value:1e-12
log p-value:-2.946e+01
Information Content per bp:1.851
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.0 +/- 24.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0155.1_Osr2_2/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----ARGTAGYAAWYTCMYA
NNTGTAGGTAGCANNT-----
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C T G A C G T C T G A C T A G A G T C C G T A C G T A C G A T A G C T A C G T A G T C G T A C A G C T C G T A
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T A C G T A C G T A C G T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----ARGTAGYAAWYTCMYA
NNNTTAGGTAGCNTNT-----
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C T G A C G T C T G A C T A G A G T C C G T A C G T A C G A T A G C T A C G T A G T C G T A C A G C T C G T A
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T A C G T A C G T A C G T A C G T A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ARGTAGYAAWYTCMYA
CAAGGTCGTAAAATCTT-
 A C G T A C G T C G T A C T G A A C T G A C G T C T G A C T A G A G T C C G T A C G T A C G A T A G C T A C G T A G T C G T A C A G C T C G T A
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T A C G T

PH0076.1_Hoxd11/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ARGTAGYAAWYTCMYA
TAAGGTCGTAAAATCCT-
 A C G T A C G T C G T A C T G A A C T G A C G T C T G A C T A G A G T C C G T A C G T A C G A T A G C T A C G T A G T C G T A C A G C T C G T A
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.55
Offset:5
Orientation:forward strand
Alignment:ARGTAGYAAWYTCMYA
-----GGAAATTCCC-
 C G T A C T G A A C T G A C G T C T G A C T A G A G T C C G T A C G T A C G A T A G C T A C G T A G T C G T A C A G C T C G T A
A C G T A C G T A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T

PH0067.1_Hoxc12/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ARGTAGYAAWYTCMYA
TTAGGTCGTAAAATTTC-
 A C G T A C G T C G T A C T G A A C T G A C G T C T G A C T A G A G T C C G T A C G T A C G A T A G C T A C G T A G T C G T A C A G C T C G T A
G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C A C G T

PB0096.1_Zfp187_1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ARGTAGYAAWYTCMYA
TTATGTACTAATAA----
 A C G T A C G T C G T A C T G A A C T G A C G T C T G A C T A G A G T C C G T A C G T A C G A T A G C T A C G T A G T C G T A C A G C T C G T A
A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:ARGTAGYAAWYTCMYA
-----GGAAATTCCC-
 C G T A C T G A A C T G A C G T C T G A C T A G A G T C C G T A C G T A C G A T A G C T A C G T A G T C G T A C A G C T C G T A
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ARGTAGYAAWYTCMYA
ADGGYAGYAGCATCT--
 A C G T C G T A C T G A A C T G A C G T C T G A C T A G A G T C C G T A C G T A C G A T A G C T A C G T A G T C G T A C A G C T C G T A
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-ARGTAGYAAWYTCMYA
AGGGAAGTCATTTCT--
 A C G T C G T A C T G A A C T G A C G T C T G A C T A G A G T C C G T A C G T A C G A T A G C T A C G T A G T C G T A C A G C T C G T A
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T A C G T A C G T