Information for 4-GTCGCATGCA (Motif 20)

A C T G A C G T G T A C A C T G A G T C C G T A A C G T A T C G A G T C C T G A
Reverse Opposite:
A G C T A C T G A T G C C G T A A C G T A C T G A G T C A C T G C G T A A G T C
p-value:1e-6
log p-value:-1.568e+01
Information Content per bp:1.939
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif16.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets41.2 +/- 28.5bp
Average Position of motif in Background62.3 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GTCGCATGCA-
-TBGCACGCAA
 A C T G A C G T G T A C A C T G A G T C C G T A A C G T A T C G A G T C C T G A A C G T
A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

PB0147.1_Max_2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GTCGCATGCA--
NNGTCGCGTGNCAC
 A C G T A C G T A C T G A C G T G T A C A C T G A G T C C G T A A C G T A T C G A G T C C T G A A C G T A C G T
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

NRF(NRF)/Promoter/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTCGCATGCA---
-GCGCATGCGCAC
 A C T G A C G T G T A C A C T G A G T C C G T A A C G T A T C G A G T C C T G A A C G T A C G T A C G T
A C G T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTCGCATGCA
GTCACATGAY
 A C T G A C G T G T A C A C T G A G T C C G T A A C G T A T C G A G T C C T G A
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

USF2/MA0526.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTCGCATGCA
GGTCACATGAC
 A C G T A C T G A C G T G T A C A C T G A G T C C G T A A C G T A T C G A G T C C T G A
C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C

PB0044.1_Mtf1_1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTCGCATGCA----
GGGCCGTGTGCAAAAA
 A C G T A C G T A C T G A C G T G T A C A C T G A G T C C G T A A C G T A T C G A G T C C T G A A C G T A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTCGCATGCA---
-GCGCATGCGCAG
 A C T G A C G T G T A C A C T G A G T C C G T A A C G T A T C G A G T C C T G A A C G T A C G T A C G T
A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

PB0154.1_Osr1_2/Jaspar

Match Rank:8
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------GTCGCATGCA
NNNTTAGGTAGCNTNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T A C A C T G A G T C C G T A A C G T A T C G A G T C C T G A
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T A C G T

USF1/MA0093.2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTCGCATGCA
GGTCACGTGGC
 A C G T A C T G A C G T G T A C A C T G A G T C C G T A A C G T A T C G A G T C C T G A
C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C

PB0170.1_Sox17_2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTCGCATGCA------
GACCACATTCATACAAT
 A C G T A C T G A C G T G T A C A C T G A G T C C G T A A C G T A T C G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T