Information for 2-AAATCACTCCRGTGGA (Motif 2)

G C T A C G T A G T C A C G A T A G T C C G T A A G T C A C G T A T G C A G T C T C G A A T C G A C G T A C T G C A T G C G T A
Reverse Opposite:
G C A T G T A C G T A C C G T A A T G C A G C T C T A G A T C G G T C A C T A G C G A T A C T G C G T A A C G T A C G T C A G T
p-value:1e-13
log p-value:-3.017e+01
Information Content per bp:1.728
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.0 +/- 27.9bp
Average Position of motif in Background50.9 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAATCACTCCRGTGGA
CAAATCACTG-------
 A C G T G C T A C G T A G T C A C G A T A G T C C G T A A G T C A C G T A T G C A G T C T C G A A T C G A C G T A C T G C A T G C G T A
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAATCACTCCRGTGGA
AAATCACTGC------
 G C T A C G T A G T C A C G A T A G T C C G T A A G T C A C G T A T G C A G T C T C G A A T C G A C G T A C T G C A T G C G T A
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAATCACTCCRGTGGA
AAATCACAGCA-----
 G C T A C G T A G T C A C G A T A G T C C G T A A G T C A C G T A T G C A G T C T C G A A T C G A C G T A C T G C A T G C G T A
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:4
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------AAATCACTCCRGTGGA
AAGGCGAAATCATCGCA-----
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G T A G T C A C G A T A G T C C G T A A G T C A C G T A T G C A G T C T C G A A T C G A C G T A C T G C A T G C G T A
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A A C G T A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.54
Offset:11
Orientation:reverse strand
Alignment:AAATCACTCCRGTGGA-
-----------GTGGAT
 G C T A C G T A G T C A C G A T A G T C C G T A A G T C A C G T A T G C A G T C T C G A A T C G A C G T A C T G C A T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:6
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------AAATCACTCCRGTGGA
GGCCATAAATCAC---------
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G T A G T C A C G A T A G T C C G T A A G T C A C G T A T G C A G T C T C G A A T C G A C G T A C T G C A T G C G T A
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AAATCACTCCRGTGGA
CCAATCAA---------
 A C G T G C T A C G T A G T C A C G A T A G T C C G T A A G T C A C G T A T G C A G T C T C G A A T C G A C G T A C T G C A T G C G T A
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AAATCACTCCRGTGGA
HNRAATCAAT--------
 A C G T A C G T G C T A C G T A G T C A C G A T A G T C C G T A A G T C A C G T A T G C A G T C T C G A A T C G A C G T A C T G C A T G C G T A
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AAATCACTCCRGTGGA
-AGCCACTCAAG----
 G C T A C G T A G T C A C G A T A G T C C G T A A G T C A C G T A T G C A G T C T C G A A T C G A C G T A C T G C A T G C G T A
A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AAATCACTCCRGTGGA
-AATTATT--------
 G C T A C G T A G T C A C G A T A G T C C G T A A G T C A C G T A T G C A G T C T C G A A T C G A C G T A C T G C A T G C G T A
A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T