Information for 3-GACTCGAGGG (Motif 17)

C T A G C G T A A G T C A G C T A G T C A C T G C G T A C T A G A C T G T A C G
Reverse Opposite:
A T G C A G T C A G T C A C G T A G T C A C T G C T G A C T A G A C G T A G T C
p-value:1e-8
log p-value:-1.933e+01
Information Content per bp:1.883
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif52.4
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets56.7 +/- 27.2bp
Average Position of motif in Background50.3 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GACTCGAGGG
----NGAAGC
 C T A G C G T A A G T C A G C T A G T C A C T G C G T A C T A G A C T G T A C G
A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

NKX2-8/MA0673.1/Jaspar

Match Rank:2
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GACTCGAGGG
CCACTTGAA--
 A C G T C T A G C G T A A G T C A G C T A G T C A C T G C G T A C T A G A C T G T A C G
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:3
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GACTCGAGGG
RSCACTYRAG--
 A C G T A C G T C T A G C G T A A G T C A G C T A G T C A C T G C G T A C T A G A C T G T A C G
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----GACTCGAGGG-
NNNNTGACCCGGCGCG
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C A G C T A G T C A C T G C G T A C T A G A C T G T A C G A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:5
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GACTCGAGGG--
--BTBRAGTGSN
 C T A G C G T A A G T C A G C T A G T C A C T G C G T A C T A G A C T G T A C G A C G T A C G T
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

FOS::JUN/MA0099.2/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GACTCGAGGG
TGACTCA----
 A C G T C T A G C G T A A G T C A G C T A G T C A C T G C G T A C T A G A C T G T A C G
A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:7
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----GACTCGAGGG--
TACGAGACTCCTCTAAC
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C A G C T A G T C A C T G C G T A C T A G A C T G T A C G A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

Tcfl5/MA0632.1/Jaspar

Match Rank:8
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GACTCGAGGG
GGCACGTGCC
 C T A G C G T A A G T C A G C T A G T C A C T G C G T A C T A G A C T G T A C G
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.49
Offset:2
Orientation:forward strand
Alignment:GACTCGAGGG--
--NTCAAGGTCA
 C T A G C G T A A G T C A G C T A G T C A C T G C G T A C T A G A C T G T A C G A C G T A C G T
A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

PB0179.1_Sp100_2/Jaspar

Match Rank:10
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----GACTCGAGGG-
NNTTTANNCGACGNA
 A C G T A C G T A C G T A C G T C T A G C G T A A G T C A G C T A G T C A C T G C G T A C T A G A C T G T A C G A C G T
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A