Information for 7-AWCACACGTGTGT (Motif 16)

G T C A C G T A T A G C G T C A A G T C C G T A G T A C A T C G A C G T A C T G A C G T A C T G C G A T
Reverse Opposite:
G C T A T A G C C G T A A G T C T C G A A T G C A C T G A C G T A C T G C A G T A T C G G C A T C A G T
p-value:1e-8
log p-value:-2.050e+01
Information Content per bp:1.725
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif63.5
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets42.6 +/- 27.2bp
Average Position of motif in Background51.1 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CLOCK/MA0819.1/Jaspar

Match Rank:1
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:AWCACACGTGTGT
--AACACGTGTT-
 G T C A C G T A T A G C G T C A A G T C C G T A G T A C A T C G A C G T A C T G A C G T A C T G C G A T
A C G T A C G T C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:2
Score:0.75
Offset:2
Orientation:forward strand
Alignment:AWCACACGTGTGT
--GGCACGTGTC-
 G T C A C G T A T A G C G T C A A G T C C G T A G T A C A T C G A C G T A C T G A C G T A C T G C G A T
A C G T A C G T C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:3
Score:0.74
Offset:3
Orientation:forward strand
Alignment:AWCACACGTGTGT
---GCACGTGT--
 G T C A C G T A T A G C G T C A A G T C C G T A G T A C A T C G A C G T A C T G A C G T A C T G C G A T
A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:AWCACACGTGTGT
----CACGTGBN-
 G T C A C G T A T A G C G T C A A G T C C G T A G T A C A T C G A C G T A C T G A C G T A C T G C G A T
A C G T A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.72
Offset:2
Orientation:forward strand
Alignment:AWCACACGTGTGT
--GNCACGTG---
 G T C A C G T A T A G C G T C A A G T C C G T A G T A C A T C G A C G T A C T G A C G T A C T G C G A T
A C G T A C G T C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.72
Offset:2
Orientation:forward strand
Alignment:AWCACACGTGTGT
--GHCACGTG---
 G T C A C G T A T A G C G T C A A G T C C G T A G T A C A T C G A C G T A C T G A C G T A C T G C G A T
A C G T A C G T C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G A C G T A C G T A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:7
Score:0.71
Offset:2
Orientation:forward strand
Alignment:AWCACACGTGTGT
--GCCACGTGT--
 G T C A C G T A T A G C G T C A A G T C C G T A G T A C A T C G A C G T A C T G A C G T A C T G C G A T
A C G T A C G T A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:8
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:AWCACACGTGTGT
----CACGTG---
 G T C A C G T A T A G C G T C A A G T C C G T A G T A C A T C G A C G T A C T G A C G T A C T G C G A T
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G A C G T A C G T A C G T

Id2/MA0617.1/Jaspar

Match Rank:9
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:AWCACACGTGTGT
---TCACGTGC--
 G T C A C G T A T A G C G T C A A G T C C G T A G T A C A T C G A C G T A C T G A C G T A C T G C G A T
A C G T A C G T A C G T G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C G T A C G T

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.71
Offset:2
Orientation:forward strand
Alignment:AWCACACGTGTGT-
--ACCACGTGGTNN
 G T C A C G T A T A G C G T C A A G T C C G T A G T A C A T C G A C G T A C T G A C G T A C T G C G A T A C G T
A C G T A C G T T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A G T C G C A T