Information for 22-GTGCATRCRCRKG (Motif 42)

A C T G A C G T A C T G A G T C C G T A A C G T C T A G A G T C C T A G A G T C C T G A A C G T A C T G
Reverse Opposite:
A G T C G T C A A G C T A C T G A G C T A C T G A G T C C G T A A C G T A C T G A G T C C G T A A G T C
p-value:1e-4
log p-value:-1.014e+01
Information Content per bp:1.884
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.2 +/- 22.1bp
Average Position of motif in Background45.4 +/- 11.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF(NRF)/Promoter/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GTGCATRCRCRKG
GCGCATGCGCAC-
 A C T G A C G T A C T G A G T C C G T A A C G T C T A G A G T C C T A G A G T C C T G A A C G T A C T G
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GTGCATRCRCRKG
GCGCATGCGCAG-
 A C T G A C G T A C T G A G T C C G T A A C G T C T A G A G T C C T A G A G T C C T G A A C G T A C T G
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTGCATRCRCRKG
GCGCCTGCGCA--
 A C T G A C G T A C T G A G T C C G T A A C G T C T A G A G T C C T A G A G T C C T G A A C G T A C T G
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GTGCATRCRCRKG
CAGATGTGCACATACGT-
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C G T C T A G A G T C C T A G A G T C C T G A A C G T A C T G
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GTGCATRCRCRKG
TACATGTGCACATAAAA-
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C G T C T A G A G T C C T A G A G T C C T G A A C G T A C T G
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTGCATRCRCRKG
ATGMATATDC---
 A C T G A C G T A C T G A G T C C G T A A C G T C T A G A G T C C T A G A G T C C T G A A C G T A C T G
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T A C G T

PB0111.1_Bhlhb2_2/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTGCATRCRCRKG---------
TGTCATTACACGTGGAAGGCGGT
 A C G T A C T G A C G T A C T G A G T C C G T A A C G T C T A G A G T C C T A G A G T C C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T A G G A C T A T G C C T A G G A C T C A G T T G C A G T A C C T G A A G T C T C A G G A C T A C T G A C T G G T C A C T G A C T A G A T C G G T A C C T A G C T A G G C A T

Myc/MA0147.2/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GTGCATRCRCRKG-
----AAGCACATGG
 A C T G A C G T A C T G A G T C C G T A A C G T C T A G A G T C C T A G A G T C C T G A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GTGCATRCRCRKG---
--ACATGCCCGGGCAT
 A C T G A C G T A C T G A G T C C G T A A C G T C T A G A G T C C T A G A G T C C T G A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GTGCATRCRCRKG--
ATGAATATTCATGAG
 A C T G A C G T A C T G A G T C C G T A A C G T C T A G A G T C C T A G A G T C C T G A A C G T A C T G A C G T A C G T
G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G