Information for 7-CAGCTGCCTC (Motif 10)

A T G C T C G A A C T G T G A C A C G T A T C G A T G C T G A C C A G T G A T C
Reverse Opposite:
C T A G G T C A A C T G T A C G T A G C T G C A A C T G T G A C A G C T T A C G
p-value:1e-11
log p-value:-2.753e+01
Information Content per bp:1.654
Number of Target Sequences with motif124.0
Percentage of Target Sequences with motif17.39%
Number of Background Sequences with motif4070.9
Percentage of Background Sequences with motif8.97%
Average Position of motif in Targets51.1 +/- 28.3bp
Average Position of motif in Background49.8 +/- 34.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myod1/MA0499.1/Jaspar

Match Rank:1
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCCTC-
TGCAGCTGTCCCT
 A C G T A C G T A T G C T C G A A C T G T G A C A C G T A T C G A T G C T G A C C A G T G A T C A C G T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCCTC
AGCAGCTGCTNN
 A C G T A C G T A T G C T C G A A C T G T G A C A C G T A T C G A T G C T G A C C A G T G A T C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---CAGCTGCCTC
NNACAGCTGC---
 A C G T A C G T A C G T A T G C T C G A A C T G T G A C A C G T A T C G A T G C T G A C C A G T G A T C
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:4
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGCCTC
NNGCAGCTGTC--
 A C G T A C G T A C G T A T G C T C G A A C T G T G A C A C G T A T C G A T G C T G A C C A G T G A T C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCCTC
AGCAGCTGCT--
 A C G T A C G T A T G C T C G A A C T G T G A C A C G T A T C G A T G C T G A C C A G T G A T C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGCCTC
CAGCAGCTGN---
 A C G T A C G T A C G T A T G C T C G A A C T G T G A C A C G T A T C G A T G C T G A C C A G T G A T C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:7
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----CAGCTGCCTC
NNVVCAGCTGBN--
 A C G T A C G T A C G T A C G T A T G C T C G A A C T G T G A C A C G T A T C G A T G C T G A C C A G T G A T C
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.78
Offset:-5
Orientation:forward strand
Alignment:-----CAGCTGCCTC--
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T A C G T A C G T A T G C T C G A A C T G T G A C A C G T A T C G A T G C T G A C C A G T G A T C A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGCCTC
NNGCAGCTGTT--
 A C G T A C G T A C G T A T G C T C G A A C T G T G A C A C G T A T C G A T G C T G A C C A G T G A T C
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:CAGCTGCCTC
CAGCTGNT--
 A T G C T C G A A C T G T G A C A C G T A T C G A T G C T G A C C A G T G A T C
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T