Information for 5-ACDCGHCCCTGACCTD (Motif 9)

C G T A A G T C C G A T A G T C C T A G G C T A A G T C A G T C G T A C A C G T A T C G C G T A A T G C A G T C A C G T C A G T
Reverse Opposite:
G T C A C G T A A C T G A T C G A C G T A T G C C G T A A C T G A C T G C T A G C A G T A G T C T C A G G C T A C T A G C G A T
p-value:1e-11
log p-value:-2.550e+01
Information Content per bp:1.762
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.1 +/- 24.6bp
Average Position of motif in Background24.7 +/- 10.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:ACDCGHCCCTGACCTD
---TGACCTTGACCT-
 C G T A A G T C C G A T A G T C C T A G G C T A A G T C A G T C G T A C A C G T A T C G C G T A A T G C A G T C A C G T C A G T
A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.76
Offset:3
Orientation:reverse strand
Alignment:ACDCGHCCCTGACCTD
---TGACCTTGACCT-
 C G T A A G T C C G A T A G T C C T A G G C T A A G T C A G T C G T A C A C G T A T C G C G T A A T G C A G T C A C G T C A G T
A C G T A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.68
Offset:9
Orientation:reverse strand
Alignment:ACDCGHCCCTGACCTD-
---------TGACCTYA
 C G T A A G T C C G A T A G T C C T A G G C T A A G T C A G T C G T A C A C G T A T C G C G T A A T G C A G T C A C G T C A G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.68
Offset:9
Orientation:reverse strand
Alignment:ACDCGHCCCTGACCTD
---------TGACCT-
 C G T A A G T C C G A T A G T C C T A G G C T A A G T C A G T C G T A C A C G T A T C G C G T A A T G C A G T C A C G T C A G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.68
Offset:9
Orientation:reverse strand
Alignment:ACDCGHCCCTGACCTD---
---------TGACCTTGAT
 C G T A A G T C C G A T A G T C C T A G G C T A A G T C A G T C G T A C A C G T A T C G C G T A A T G C A G T C A C G T C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.66
Offset:8
Orientation:forward strand
Alignment:ACDCGHCCCTGACCTD--
--------NTGACCTTGA
 C G T A A G T C C G A T A G T C C T A G G C T A A G T C A G T C G T A C A C G T A T C G C G T A A T G C A G T C A C G T C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:ACDCGHCCCTGACCTD--
-----CNNTTGACCTTTG
 C G T A A G T C C G A T A G T C C T A G G C T A A G T C A G T C G T A C A C G T A T C G C G T A A T G C A G T C A C G T C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.65
Offset:8
Orientation:reverse strand
Alignment:ACDCGHCCCTGACCTD--
--------ATGACCTTGA
 C G T A A G T C C G A T A G T C C T A G G C T A A G T C A G T C G T A C A C G T A T C G C G T A A T G C A G T C A C G T C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:ACDCGHCCCTGACCTD-----
-----NNNNTGACCTTTNNNN
 C G T A A G T C C G A T A G T C C T A G G C T A A G T C A G T C G T A C A C G T A T C G C G T A A T G C A G T C A C G T C A G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.64
Offset:8
Orientation:reverse strand
Alignment:ACDCGHCCCTGACCTD
--------GTGACCTT
 C G T A A G T C C G A T A G T C C T A G G C T A A G T C A G T C G T A C A C G T A T C G C G T A A T G C A G T C A C G T C A G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T