Information for 22-AAAGRGCTTCGGA (Motif 39)

C G T A C T G A C T G A A C T G C T G A C T A G A G T C G A C T A C G T A G T C A C T G A T C G G C T A
Reverse Opposite:
C G A T A T G C T A G C T A C G G T C A C T G A A C T G A G T C A G C T T A G C A G C T G A C T C G A T
p-value:1e-6
log p-value:-1.442e+01
Information Content per bp:1.706
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.96%
Number of Background Sequences with motif186.4
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets53.3 +/- 33.1bp
Average Position of motif in Background50.6 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.56
Offset:5
Orientation:forward strand
Alignment:AAAGRGCTTCGGA
-----GCTTCC--
 C G T A C T G A C T G A A C T G C T G A C T A G A G T C G A C T A C G T A G T C A C T G A T C G G C T A
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AAAGRGCTTCGGA
TTAAGTGCTT----
 A C G T C G T A C T G A C T G A A C T G C T G A C T A G A G T C G A C T A C G T A G T C A C T G A T C G G C T A
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AAAGRGCTTCGGA
----NGCTN----
 C G T A C T G A C T G A A C T G C T G A C T A G A G T C G A C T A C G T A G T C A C T G A T C G G C T A
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AAAGRGCTTCGGA
-AACAGCTGCAG-
 C G T A C T G A C T G A A C T G C T G A C T A G A G T C G A C T A C G T A G T C A C T G A T C G G C T A
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AAAGRGCTTCGGA
TTGAGTGSTT----
 A C G T C G T A C T G A C T G A A C T G C T G A C T A G A G T C G A C T A C G T A G T C A C T G A T C G G C T A
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:6
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----AAAGRGCTTCGGA
NATTTAAGTACTTANNA
 A C G T A C G T A C G T A C G T C G T A C T G A C T G A A C T G C T G A C T A G A G T C G A C T A C G T A G T C A C T G A T C G G C T A
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AAAGRGCTTCGGA
-AACAGCTG----
 C G T A C T G A C T G A A C T G C T G A C T A G A G T C G A C T A C G T A G T C A C T G A T C G G C T A
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---AAAGRGCTTCGGA
CNTTAAGTACTTAANG
 A C G T A C G T A C G T C G T A C T G A C T G A A C T G C T G A C T A G A G T C G A C T A C G T A G T C A C T G A T C G G C T A
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

Myog/MA0500.1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AAAGRGCTTCGGA
-GACAGCTGCAG-
 C G T A C T G A C T G A A C T G C T G A C T A G A G T C G A C T A C G T A G T C A C T G A T C G G C T A
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T

PH0116.1_Nkx2-9/Jaspar

Match Rank:10
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----AAAGRGCTTCGGA
NATTTAAGTACTTNAAA
 A C G T A C G T A C G T A C G T C G T A C T G A C T G A A C T G C T G A C T A G A G T C G A C T A C G T A G T C A C T G A T C G G C T A
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A