Information for 20-CTGCGAGTTTGCG (Motif 36)

G T A C A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C C G T A C G T A G T C A A G T C A C G T A G T C A C T G A G T C G T C A A C T G
p-value:1e-7
log p-value:-1.698e+01
Information Content per bp:1.932
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.5 +/- 18.0bp
Average Position of motif in Background21.1 +/- 6.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTGCGAGTTTGCG---
NNGCGTGTGTGCNGCN
 G T A C A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTGCGAGTTTGCG
--GGGAATTTCC-
 G T A C A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C T G A G T C A C T G
A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

PB0136.1_IRC900814_2/Jaspar

Match Rank:3
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CTGCGAGTTTGCG-
TTTTACGACTTTCCAT
 A C G T A C G T G T A C A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C T G A G T C A C T G A C G T
C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

Myb/MA0100.2/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTGCGAGTTTGCG
-TGGCAGTTGN--
 G T A C A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C T G A G T C A C T G
A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CTGCGAGTTTGCG
--GGGAATTTCC-
 G T A C A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C T G A G T C A C T G
A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:6
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CTGCGAGTTTGCG
NNNNATGCGGGTNNNN-
 A C G T A C G T A C G T A C G T G T A C A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C T G A G T C A C T G
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A A C G T

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTGCGAGTTTGCG
GCNGCCATCTTG--
 A C G T G T A C A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C T G A G T C A C T G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:CTGCGAGTTTGCG----
-------TTTGCGGTTT
 G T A C A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

PB0075.1_Sp100_1/Jaspar

Match Rank:9
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CTGCGAGTTTGCG------
-----ATTTTCCGNNAAAT
 G T A C A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A C G A T C G A T G C A T C A G T G T A C A T G C A T C G C A G T C T G A C G T A G C T A G C T A A G C T

NRF1/MA0506.1/Jaspar

Match Rank:10
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CTGCGAGTTTGCG--
----GCGCCTGCGCA
 G T A C A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A