Information for 7-CTTTCATGAG (Motif 34)

G A T C A C G T A C G T C G A T A G T C C G T A A C G T C A T G C T G A T C A G
Reverse Opposite:
A G T C G A C T G T A C T G C A G C A T T C A G G C T A T G C A T G C A C T A G
p-value:1e-8
log p-value:-1.843e+01
Information Content per bp:1.667
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.39%
Number of Background Sequences with motif420.8
Percentage of Background Sequences with motif0.88%
Average Position of motif in Targets50.9 +/- 27.4bp
Average Position of motif in Background50.4 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CTTTCATGAG-
-TTTTATTRGN
 G A T C A C G T A C G T C G A T A G T C C G T A A C G T C A T G C T G A T C A G A C G T
A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CTTTCATGAG---
ACATTCATGACACG
 A C G T G A T C A C G T A C G T C G A T A G T C C G T A A C G T C A T G C T G A T C A G A C G T A C G T A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PH0068.1_Hoxc13/Jaspar

Match Rank:3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CTTTCATGAG----
NAATTTTACGAGNTNN
 A C G T A C G T G A T C A C G T A C G T C G A T A G T C C G T A A C G T C A T G C T G A T C A G A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CTTTCATGAG-
-TTTTATKRGG
 G A T C A C G T A C G T C G A T A G T C C G T A A C G T C A T G C T G A T C A G A C G T
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

HOXC13/MA0907.1/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CTTTCATGAG-
NTTTTACGAGN
 G A T C A C G T A C G T C G A T A G T C C G T A A C G T C A T G C T G A T C A G A C G T
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

HOXC10/MA0905.1/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTTTCATGAG
NTTTTACGAC
 G A T C A C G T A C G T C G A T A G T C C G T A A C G T C A T G C T G A T C A G
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C

PH0048.1_Hoxa13/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CTTTCATGAG----
ANATTTTACGAGNNNN
 A C G T A C G T G A T C A C G T A C G T C G A T A G T C C G T A A C G T C A T G C T G A T C A G A C G T A C G T A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

HOXD13/MA0909.1/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTTTCATGAG
NTTTTATTGG
 G A T C A C G T A C G T C G A T A G T C C G T A A C G T C A T G C T G A T C A G
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

Hoxa11/MA0911.1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTTTCATGAG-
ANTTTTACGACC
 A C G T G A T C A C G T A C G T C G A T A G T C C G T A A C G T C A T G C T G A T C A G A C G T
G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C

TCF7L2/MA0523.1/Jaspar

Match Rank:10
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CTTTCATGAG-
TNCCTTTGATCTTN
 A C G T A C G T A C G T G A T C A C G T A C G T C G A T A G T C C G T A A C G T C A T G C T G A T C A G A C G T
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T