Information for 13-GGACTGTCACTGGCCC (Motif 21)

A C T G A T C G C T G A A G T C A G C T A C T G A C G T A T G C G T C A A G T C A C G T A T C G A T C G G T A C G T A C A G T C
Reverse Opposite:
T C A G A C T G C A T G A T G C A T G C C G T A A C T G C A G T A T C G G T C A A G T C C T G A A C T G G A C T A T G C A G T C
p-value:1e-9
log p-value:-2.088e+01
Information Content per bp:1.754
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif11.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.9 +/- 25.5bp
Average Position of motif in Background49.8 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGACTGTCACTGGCCC
-GSCTGTCACTCA---
 A C T G A T C G C T G A A G T C A G C T A C T G A C G T A T G C G T C A A G T C A C G T A T C G A T C G G T A C G T A C A G T C
A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GGACTGTCACTGGCCC
---CTGTTCCTGG---
 A C T G A T C G C T G A A G T C A G C T A C T G A C G T A T G C G T C A A G T C A C G T A T C G A T C G G T A C G T A C A G T C
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGACTGTCACTGGCCC---
---CAATCACTGGCAGAAT
 A C T G A T C G C T G A A G T C A G C T A C T G A C G T A T G C G T C A A G T C A C G T A T C G A T C G G T A C G T A C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGACTGTCACTGGCCC
--ACTTTCACTTTC--
 A C T G A T C G C T G A A G T C A G C T A C T G A C G T A T G C G T C A A G T C A C G T A T C G A T C G G T A C G T A C A G T C
A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGACTGTCACTGGCCC
-VGCTGWCAVB-----
 A C T G A T C G C T G A A G T C A G C T A C T G A C G T A T G C G T C A A G T C A C G T A T C G A T C G G T A C G T A C A G T C
A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GGACTGTCACTGGCCC
AAGCACCTGTCAATAT---
 A C G T A C G T A C G T A C T G A T C G C T G A A G T C A G C T A C T G A C G T A T G C G T C A A G T C A C G T A T C G A T C G G T A C G T A C A G T C
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GGACTGTCACTGGCCC
BTGACCTCTNNHTGACCY
 A C G T A C G T A C T G A T C G C T G A A G T C A G C T A C T G A C G T A T G C G T C A A G T C A C G T A T C G A T C G G T A C G T A C A G T C
A T C G A C G T A T C G T G C A G T A C A G T C A G C T A T G C C G A T T A C G A T G C G T A C G A C T T A C G T G C A G T A C G A T C A G C T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GGACTGTCACTGGCCC
--NCTGTCAATCAN--
 A C T G A T C G C T G A A G T C A G C T A C T G A C G T A T G C G T C A A G T C A C G T A T C G A T C G G T A C G T A C A G T C
A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GGACTGTCACTGGCCC
--GCTGTG--------
 A C T G A T C G C T G A A G T C A G C T A C T G A C G T A T G C G T C A A G T C A C G T A T C G A T C G G T A C G T A C A G T C
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GGACTGTCACTGGCCC
--CCTGTCAA------
 A C T G A T C G C T G A A G T C A G C T A C T G A C G T A T G C G T C A A G T C A C G T A T C G A T C G G T A C G T A C A G T C
A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T