Information for 5-TTGCATCGGC (Motif 20)

A C G T A G C T A C T G A G T C G T C A A G C T T G A C A C T G A C T G A G T C
Reverse Opposite:
C T A G A G T C G T A C A C T G T C G A A C G T A C T G A G T C T C G A C G T A
p-value:1e-9
log p-value:-2.097e+01
Information Content per bp:1.855
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif49.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets62.7 +/- 22.8bp
Average Position of motif in Background52.3 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTGCATCGGC
ATTGCATCAK-
 A C G T A C G T A G C T A C T G A G T C G T C A A G C T T G A C A C T G A C T G A G T C
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TTGCATCGGC
ATTGCATCAT-
 A C G T A C G T A G C T A C T G A G T C G T C A A G C T T G A C A C T G A C T G A G T C
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTGCATCGGC
GGGATTGCATNN--
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G A G T C G T C A A G C T T G A C A C T G A C T G A G T C
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T A C G T A C G T

ATF4/MA0833.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTGCATCGGC-
TATTGCATCATCC
 A C G T A C G T A C G T A G C T A C T G A G T C G T C A A G C T T G A C A C T G A C T G A G T C A C G T
A C G T T C G A C G A T C A G T C T A G G T A C T C G A C G A T G A T C G T C A A C G T G T A C G A T C

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTGCATCGGC
TTGCAACATN
 A C G T A G C T A C T G A G T C G T C A A G C T T G A C A C T G A C T G A G T C
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTGCATCGGC
ATTTGCATAT--
 A C G T A C G T A C G T A G C T A C T G A G T C G T C A A G C T T G A C A C T G A C T G A G T C
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTGCATCGGC--
-TGCGTGGGCGT
 A C G T A G C T A C T G A G T C G T C A A G C T T G A C A C T G A C T G A G T C A C G T A C G T
A C G T G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTGCATCGGC
ATTTGCATAA--
 A C G T A C G T A C G T A G C T A C T G A G T C G T C A A G C T T G A C A C T G A C T G A G T C
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TTGCATCGGC
TTCATTTGCATAT--
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G A G T C G T C A A G C T T G A C A C T G A C T G A G T C
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TTGCATCGGC
BTVATTWGCATA---
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G A G T C G T C A A G C T T G A C A C T G A C T G A G T C
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T