Information for 1-TTCCNGGAAG (Motif 1)

A C G T C G A T A G T C A G T C A T G C T A C G A C T G G C T A C G T A C A T G
Reverse Opposite:
G T A C A C G T C G A T G T A C A T G C T A C G T C A G A C T G G C T A C G T A
p-value:1e-31
log p-value:-7.252e+01
Information Content per bp:1.756
Number of Target Sequences with motif74.0
Percentage of Target Sequences with motif9.65%
Number of Background Sequences with motif821.5
Percentage of Background Sequences with motif1.71%
Average Position of motif in Targets54.0 +/- 22.6bp
Average Position of motif in Background50.5 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:TTCCNGGAAG
TTCCNGGAAG
 A C G T C G A T A G T C A G T C A T G C T A C G A C T G G C T A C G T A C A T G
G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:2
Score:0.95
Offset:-2
Orientation:forward strand
Alignment:--TTCCNGGAAG
NTTTCCNGGAAA
 A C G T A C G T A C G T C G A T A G T C A G T C A T G C T A C G A C T G G C T A C G T A C A T G
T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:3
Score:0.95
Offset:-3
Orientation:forward strand
Alignment:---TTCCNGGAAG-
NNCTTCCNGGAAGN
 A C G T A C G T A C G T A C G T C G A T A G T C A G T C A T G C T A C G A C T G G C T A C G T A C A T G A C G T
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:4
Score:0.94
Offset:-3
Orientation:forward strand
Alignment:---TTCCNGGAAG-
NATTTCCNGGAAAT
 A C G T A C G T A C G T A C G T C G A T A G T C A G T C A T G C T A C G A C T G G C T A C G T A C A T G A C G T
A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T

STAT1/MA0137.3/Jaspar

Match Rank:5
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-TTCCNGGAAG
TTTCCTGGAAA
 A C G T A C G T C G A T A G T C A G T C A T G C T A C G A C T G G C T A C G T A C A T G
G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A

Stat4/MA0518.1/Jaspar

Match Rank:6
Score:0.92
Offset:-4
Orientation:reverse strand
Alignment:----TTCCNGGAAG
NNNTTTCCTGGAAA
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C A G T C A T G C T A C G A C T G G C T A C G T A C A T G
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A

STAT3/MA0144.2/Jaspar

Match Rank:7
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-TTCCNGGAAG
TTTCCCAGAAN
 A C G T A C G T C G A T A G T C A G T C A T G C T A C G A C T G G C T A C G T A C A T G
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:8
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--TTCCNGGAAG
ATTTCCAAGAA-
 A C G T A C G T A C G T C G A T A G T C A G T C A T G C T A C G A C T G G C T A C G T A C A T G
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:9
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-TTCCNGGAAG----
TTTCCTGGAAAGNNN
 A C G T A C G T C G A T A G T C A G T C A T G C T A C G A C T G G C T A C G T A C A T G A C G T A C G T A C G T A C G T
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:10
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--TTCCNGGAAG
NTTTCTNAGAAA
 A C G T A C G T A C G T C G A T A G T C A G T C A T G C T A C G A C T G G C T A C G T A C A T G
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A