Information for 1-TWWYYTKTTTTWT (Motif 1)

G A C T C G A T C G A T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A G C T
Reverse Opposite:
C T G A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T A C G T A C T G A
p-value:1e-8
log p-value:-1.932e+01
Information Content per bp:1.823
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif29.41%
Number of Background Sequences with motif1101.2
Percentage of Background Sequences with motif2.35%
Average Position of motif in Targets64.4 +/- 26.6bp
Average Position of motif in Background50.6 +/- 40.9bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TWWYYTKTTTTWT----
NNNNTTTTTTTTTNAAC
 G A C T C G A T C G A T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A G C T A C G T A C G T A C G T A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TWWYYTKTTTTWT---
-NTNTTGTTGTTTGTN
 G A C T C G A T C G A T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A G C T A C G T A C G T A C G T
A C G T G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.70
Offset:5
Orientation:reverse strand
Alignment:TWWYYTKTTTTWT------
-----TTTTTTTTCNNGTN
 G A C T C G A T C G A T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TWWYYTKTTTTWT----
GNATTTTTTTTTTGANC
 G A C T C G A T C G A T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A G C T A C G T A C G T A C G T A C G T
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

HOXD13/MA0909.1/Jaspar

Match Rank:5
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:TWWYYTKTTTTWT---
------NTTTTATTGG
 G A C T C G A T C G A T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

PB0148.1_Mtf1_2/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TWWYYTKTTTTWT----
---NNTTTTTCTTATNT
 G A C T C G A T C G A T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

HOXA13/MA0650.1/Jaspar

Match Rank:7
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:TWWYYTKTTTTWT---
------TTTTTATTGG
 G A C T C G A T C G A T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.64
Offset:7
Orientation:reverse strand
Alignment:TWWYYTKTTTTWT----
-------TTTTATTRGN
 G A C T C G A T C G A T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:9
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:TWWYYTKTTTTWT---
------NTTTTATGAC
 G A C T C G A T C G A T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

HOXB13/MA0901.1/Jaspar

Match Rank:10
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:TWWYYTKTTTTWT---
------NTTTTATTGG
 G A C T C G A T C G A T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G