Information for 5-CGBCTCCCAGCAG (Motif 9)

T G A C C T A G A C T G A G T C A C G T A G T C A G T C A G T C G T C A C T A G A T G C C G T A A T C G
Reverse Opposite:
A T G C A C G T A T C G A G T C A C G T A C T G A C T G A C T G C G T A A C T G T A G C A G T C A C T G
p-value:1e-6
log p-value:-1.484e+01
Information Content per bp:1.797
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif27.27%
Number of Background Sequences with motif59.9
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets76.3 +/- 9.0bp
Average Position of motif in Background47.5 +/- 37.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CGBCTCCCAGCAG---
-ATTTCCCAGVAKSCY
 T G A C C T A G A C T G A G T C A C G T A G T C A G T C A G T C G T C A C T A G A T G C C G T A A T C G A C G T A C G T A C G T
A C G T T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CGBCTCCCAGCAG
----TCCCCA---
 T G A C C T A G A C T G A G T C A C G T A G T C A G T C A G T C G T C A C T A G A T G C C G T A A T C G
A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CGBCTCCCAGCAG
--GCTCCG-----
 T G A C C T A G A C T G A G T C A C G T A G T C A G T C A G T C G T C A C T A G A T G C C G T A A T C G
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGBCTCCCAGCAG----
--CCACACAGCAGGAGA
 T G A C C T A G A C T G A G T C A C G T A G T C A G T C A G T C G T C A C T A G A T G C C G T A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGBCTCCCAGCAG----
--CCACACAGCAGGAGA
 T G A C C T A G A C T G A G T C A C G T A G T C A G T C A G T C G T C A C T A G A T G C C G T A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CGBCTCCCAGCAG
---CTGCCCGCA-
 T G A C C T A G A C T G A G T C A C G T A G T C A G T C A G T C G T C A C T A G A T G C C G T A A T C G
A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T

STAT3/MA0144.2/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CGBCTCCCAGCAG
--TTTCCCAGAAN
 T G A C C T A G A C T G A G T C A C G T A G T C A G T C A G T C G T C A C T A G A T G C C G T A A T C G
A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGBCTCCCAGCAG
CNGTCCTCCC-----
 A C G T A C G T T G A C C T A G A C T G A G T C A C G T A G T C A G T C A G T C G T C A C T A G A T G C C G T A A T C G
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CGBCTCCCAGCAG--
RACTACAACTCCCAGVAKGC
 A C G T A C G T A C G T A C G T A C G T T G A C C T A G A C T G A G T C A C G T A G T C A G T C A G T C G T C A C T A G A T G C C G T A A T C G A C G T A C G T
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CGBCTCCCAGCAG----
-----CACAGCAGGGGG
 T G A C C T A G A C T G A G T C A C G T A G T C A G T C A G T C G T C A C T A G A T G C C G T A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G