Information for 13-TGGYTCCTTTCCTACA (Motif 37)

C G A T T C A G A T C G A G C T G C A T A G T C A G T C G A C T A G C T A C G T T A G C G T A C C A G T G C T A T A G C C G T A
Reverse Opposite:
G A C T A C T G C G A T G C T A C A T G A T C G G T C A C T G A C T G A C T A G C T A G C G T A C T G A A T G C A G T C G C T A
p-value:1e-3
log p-value:-7.104e+00
Information Content per bp:1.580
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif27.27%
Number of Background Sequences with motif803.2
Percentage of Background Sequences with motif1.77%
Average Position of motif in Targets69.8 +/- 19.1bp
Average Position of motif in Background49.6 +/- 35.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGGYTCCTTTCCTACA
NNGCACCTTTCTCC--
 C G A T T C A G A T C G A G C T G C A T A G T C A G T C G A C T A G C T A C G T T A G C G T A C C A G T G C T A T A G C C G T A
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TGGYTCCTTTCCTACA
-----CCTTTGTT---
 C G A T T C A G A T C G A G C T G C A T A G T C A G T C G A C T A G C T A C G T T A G C G T A C C A G T G C T A T A G C C G T A
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGGYTCCTTTCCTACA
AGGVNCCTTTGT----
 C G A T T C A G A T C G A G C T G C A T A G T C A G T C G A C T A G C T A C G T T A G C G T A C C A G T G C T A T A G C C G T A
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGGYTCCTTTCCTACA--
-NNTTCCTTTGATCTNNA
 C G A T T C A G A T C G A G C T G C A T A G T C A G T C G A C T A G C T A C G T T A G C G T A C C A G T G C T A T A G C C G T A A C G T A C G T
A C G T C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TGGYTCCTTTCCTACA
-----CCTTTGTTTT-
 C G A T T C A G A T C G A G C T G C A T A G T C A G T C G A C T A G C T A C G T T A G C G T A C C A G T G C T A T A G C C G T A
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TGGYTCCTTTCCTACA
-----CCWTTGTY---
 C G A T T C A G A T C G A G C T G C A T A G T C A G T C G A C T A G C T A C G T T A G C G T A C C A G T G C T A T A G C C G T A
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGGYTCCTTTCCTACA--
-AATCCCTTTGATCTATC
 C G A T T C A G A T C G A G C T G C A T A G T C A G T C G A C T A G C T A C G T T A G C G T A C C A G T G C T A T A G C C G T A A C G T A C G T
A C G T C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGGYTCCTTTCCTACA--
-NNTTCCTTTGATCTANA
 C G A T T C A G A T C G A G C T G C A T A G T C A G T C G A C T A G C T A C G T T A G C G T A C C A G T G C T A T A G C C G T A A C G T A C G T
A C G T C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGGYTCCTTTCCTACA--
-ATTTCCTTTGATCTATA
 C G A T T C A G A T C G A G C T G C A T A G T C A G T C G A C T A G C T A C G T T A G C G T A C C A G T G C T A T A G C C G T A A C G T A C G T
A C G T C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TGGYTCCTTTCCTACA
-----YCTTTGTTCC-
 C G A T T C A G A T C G A G C T G C A T A G T C A G T C G A C T A G C T A C G T T A G C G T A C C A G T G C T A T A G C C G T A
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T